myRT

myRT report for GCA_009719395.1_ASM971939v1

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Seq: WNCF01000104.1 Parasutterella excrementihominis strain BIOML-A8 scaffold104_size1910, whole genome shotgun sequence (1910 bp)
Overview 1 RT 1: 106-1908 bp Neighborhood of RT #1 [106, 1908] RVT-GII GIIM Feature: gene Location: 106-1497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1 057 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1339 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 20-1 339 bp Feature: gene Location: 1750-1908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCF01000105.1 Parasutterella excrementihominis strain BIOML-A8 scaffold105_size1884, whole genome shotgun sequence (1884 bp)
Overview 1 RT 1: 63-1230 bp Neighborhood of RT #1 [63, 1394] RVT-GII GIIM Feature: gene Location: 63-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 85-912 bp Feature: domain Description: GIIM Note: maturase Location: 999-1230 bp Feature: domain Description: GIIM Note: maturase Location: 999-12 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCF01000013.1 Parasutterella excrementihominis strain BIOML-A8 scaffold13_size59877, whole genome shotgun sequence (59877 bp)
Overview 1 RT 1: 22972-29218 bp Neighborhood of RT #1 [22972, 29223] cysS RVT-GII GIIM M20_Acy1_IAAspH DcuC Feature: gene Location: 22972-24366 bp Feature: domain Description: cysS Location: 22975-24361 bp Feature: domain Description: cysS Location: 22975-243 61 bp Feature: gene Location: 24598-24804 bp Feature: gene Location: 24930-26213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25164-25782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25164-25782 bp Feature: domain Description: GIIM Note: maturase Location: 25830-26058 bp Feature: domain Description: GIIM Note: maturase Location: 2583 0-26058 bp Feature: gene Location: 26423-27715 bp Feature: domain Description: M20_Acy1_IAAspH Location: 26456-27686 bp Feature: domain Description: M20_Acy1_IAAspH Location: 26456-27686 bp Feature: gene Location: 27964-29223 bp Feature: domain Description: DcuC Location: 27991-29218 bp Feature: domain Description: DcuC Location: 27991-29218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cysS (TIGR00435), RVT-GII, GIIM (pfam08388), M20_Acy1_IAAspH (cd05665), DcuC (TIGR00771)

Seq: WNCF01000054.1 Parasutterella excrementihominis strain BIOML-A8 scaffold54_size13807, whole genome shotgun sequence (13807 bp)
Overview 1 RT 1: 69-4564 bp Neighborhood of RT #1 [69, 4914] AAA_23 RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD AAA_15 TOPRIM_OLD Feature: gene Location: 69-455 bp Feature: domain Description: AAA_23 Location: 207-426 bp Feature: domain Description: AAA_23 Location: 207-4 26 bp Feature: gene Location: 457-1383 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 559-1150 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 559-1150 bp Feature: gene Location: 1755-3272 bp Feature: domain Description: DEXQc_UvrD Location: 1788-2007 bp Feature: domain Description: DEXQc_UvrD Location: 1788-2007 bp Feature: domain Description: DEXQc_UvrD Location: 2043-2256 bp Feature: domain Description: DEXQc_UvrD Location: 204 3-2256 bp Feature: domain Description: UvrD Location: 2733-3231 bp Feature: domain Description: UvrD Location: 2733-3231 bp Feature: gene Location: 3265-4914 bp Feature: domain Description: AAA_15 Location: 3274-4207 bp Feature: domain Description: AAA_15 Location: 3274 -4 207 bp Feature: domain Description: TOPRIM_OLD Location: 4330-4564 bp Feature: domain Description: TOPRIM_OLD Location: 4 330-4 564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), UvrD (COG0210), AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons, AAA_23 (pfam13476)

Seq: WNCF01000007.1 Parasutterella excrementihominis strain BIOML-A8 scaffold7_size96624, whole genome shotgun sequence (96624 bp)
Overview 1 RT 1: 91781-96621 bp Neighborhood of RT #1 [91781, 96621] PRK13553 M20_Acy1_IAAspH RVT-GII GIIM Feature: gene Location: 91781-92623 bp Feature: domain Description: PRK13553 Location: 91868-92531 bp Feature: domain Description: PRK135 5 3 Location: 91868-925 31 bp Feature: gene Location: 92904-94172 bp Feature: domain Description: M20_Acy1_IAAspH Location: 92925-94152 bp Feature: domain Description: M20_Acy1_IAAspH Location: 92925 -9415 2 bp Feature: gene Location: 94821-96212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95148-95772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 148-95 772 bp Feature: domain Description: GIIM Note: maturase Location: 95835-96045 bp Feature: domain Description: GIIM Note: maturase Location: 95 835 -96045 bp Feature: gene Location: 96439-96621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13553 (fumarate reductase cytochrome b subunit), M20_Acy1_IAAspH (cd05665), RVT-GII, GIIM (pfam08388)

Seq: WNCF01000082.1 Parasutterella excrementihominis strain BIOML-A8 scaffold82_size5603, whole genome shotgun sequence (5603 bp)
Overview 1 RT 1: 54-4884 bp Neighborhood of RT #1 [54, 4889] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 54-524 bp Feature: domain Description: Bac_Flav_CT_G Location: 120-501 bp Feature: domain Description: Bac_Flav_CT_G Location: 120-501 bp Feature: gene Location: 577-2277 bp Feature: RT Description: RVT_N Location: 676-919 bp Feature: RT Description: RVT_N Location: 6 76 -919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 964-1612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96 4-16 12 bp Feature: domain Description: GIIM Note: maturase Location: 1663-1897 bp Feature: domain Description: GIIM Note: maturase Location: 16 6 3-1897 bp Feature: gene Location: 2457-2663 bp Feature: gene Location: 2856-4889 bp Feature: domain Description: Bac_Flav_CT_G Location: 2859-4884 bp Feature: domain Description: Bac_Flav_CT_G Location: 2859-4884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WNCF01000086.1 Parasutterella excrementihominis strain BIOML-A8 scaffold86_size6532, whole genome shotgun sequence (7083 bp)
Overview 1 RT 1: 3354-6810 bp Neighborhood of RT #1 [3354, 6977] frdB RVT-GII RVT-GII GIIM Feature: gene Location: 3354-4208 bp Feature: domain Description: frdB Location: 3432-4137 bp Feature: domain Description: frdB Location: 3432-4137 bp Feature: gene Location: 4287-4457 bp Feature: gene Location: 4687-5190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5014-5161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5014-5161 bp Feature: gene Location: 5187-5414 bp Feature: gene Location: 5586-6977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5913-6537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5913-6537 bp Feature: domain Description: GIIM Note: maturase Location: 6600-6810 bp Feature: domain Description: GIIM Note: maturase Location: 6600-6810 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT frdB (PRK13552), RVT-GII, GIIM (pfam08388)