myRT

myRT report for GCA_009719405.1_ASM971940v1

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Seq: WNCG01000111.1 Parasutterella excrementihominis strain BIOML-A7 scaffold111_size1910, whole genome shotgun sequence (1910 bp)
Overview 1 RT 1: 3-1647 bp Neighborhood of RT #1 [3, 1805] RVT-GII GIIM Feature: gene Location: 3-242 bp Feature: gene Location: 414-1805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741-1365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741 -1 365 bp Feature: domain Description: GIIM Note: maturase Location: 1428-1647 bp Feature: domain Description: GIIM Note: maturase Location: 1 428-1 647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCG01000112.1 Parasutterella excrementihominis strain BIOML-A7 scaffold112_size1909, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 107-1906 bp Neighborhood of RT #1 [107, 1906] RVT-GII GIIM Feature: gene Location: 107-1498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434-1058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434-1058 bp Feature: domain Description: GIIM Note: maturase Location: 1121-1331 bp Feature: domain Description: GIIM Note: maturase Location: 112 1-1331 bp Feature: gene Location: 1670-1906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCG01000113.1 Parasutterella excrementihominis strain BIOML-A7 scaffold113_size1909, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 106-1906 bp Neighborhood of RT #1 [106, 1906] RVT-GII GIIM Feature: gene Location: 106-1497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 3 -1057 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1330 bp Feature: domain Description: GIIM Note: maturase Location: 1120-13 3 0 bp Feature: gene Location: 1727-1906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCG01000116.1 Parasutterella excrementihominis strain BIOML-A7 scaffold116_size1884, whole genome shotgun sequence (1884 bp)
Overview 1 RT 1: 63-1230 bp Neighborhood of RT #1 [63, 1394] RVT-GII GIIM Feature: gene Location: 63-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: domain Description: GIIM Note: maturase Location: 999-1230 bp Feature: domain Description: GIIM Note: maturase Location: 999-1230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCG01000011.1 Parasutterella excrementihominis strain BIOML-A7 scaffold11_size59878, whole genome shotgun sequence (59878 bp)
Overview 1 RT 1: 22973-29219 bp Neighborhood of RT #1 [22973, 29224] cysS RVT-GII GIIM M20_Acy1_IAAspH DcuC Feature: gene Location: 22973-24367 bp Feature: domain Description: cysS Location: 22976-24362 bp Feature: domain Description: cysS Location: 22976-24362 bp Feature: gene Location: 24599-24805 bp Feature: gene Location: 24931-26214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25165-25783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 165 -25 783 bp Feature: domain Description: GIIM Note: maturase Location: 25831-26059 bp Feature: domain Description: GIIM Note: maturase Location: 25 831-2605 9 bp Feature: gene Location: 26424-27716 bp Feature: domain Description: M20_Acy1_IAAspH Location: 26457-27687 bp Feature: domain Description: M20_Acy1_IAAspH Location: 2645 7-27687 bp Feature: gene Location: 27965-29224 bp Feature: domain Description: DcuC Location: 27992-29219 bp Feature: domain Description: DcuC Location: 27992-29219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cysS (TIGR00435), RVT-GII, GIIM (pfam08388), M20_Acy1_IAAspH (cd05665), DcuC (TIGR00771)

Seq: WNCG01000065.1 Parasutterella excrementihominis strain BIOML-A7 scaffold65_size11744, whole genome shotgun sequence (11744 bp)
Overview 1 RT 1: 61-4556 bp Neighborhood of RT #1 [61, 4906] AAA_23 RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD AAA_15 TOPRIM_OLD Feature: gene Location: 61-447 bp Feature: domain Description: AAA_23 Location: 199-418 bp Feature: domain Description: AAA_23 Location: 199-418 bp Feature: gene Location: 449-1375 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 551-1142 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 551-1142 bp Feature: gene Location: 1747-3264 bp Feature: domain Description: DEXQc_UvrD Location: 1780-1999 bp Feature: domain Description: DEXQc_UvrD Location: 1780-1999 bp Feature: domain Description: DEXQc_UvrD Location: 2035-2248 bp Feature: domain Description: DEXQc_UvrD Location: 2035-2248 bp Feature: domain Description: UvrD Location: 2725-3223 bp Feature: domain Description: UvrD Location: 2725-3223 bp Feature: gene Location: 3257-4906 bp Feature: domain Description: AAA_15 Location: 3266-4199 bp Feature: domain Description: AAA_15 Location: 326 6 -4199 bp Feature: domain Description: TOPRIM_OLD Location: 4322-4556 bp Feature: domain Description: TOPRIM_OLD Location: 4322-4556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), UvrD (COG0210), AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons, AAA_23 (pfam13476)

Seq: WNCG01000088.1 Parasutterella excrementihominis strain BIOML-A7 scaffold88_size5604, whole genome shotgun sequence (5604 bp)
Overview 1 RT 1: 54-4885 bp Neighborhood of RT #1 [54, 4890] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 54-575 bp Feature: domain Description: Bac_Flav_CT_G Location: 171-552 bp Feature: domain Description: Bac_Flav_CT_G Location: 17 1-552 bp Feature: gene Location: 578-2278 bp Feature: RT Description: RVT_N Location: 677-920 bp Feature: RT Description: RVT_N Location: 67 7 -920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1613 bp Feature: domain Description: GIIM Note: maturase Location: 1664-1898 bp Feature: domain Description: GIIM Note: maturase Location: 1664-1898 bp Feature: gene Location: 2458-2664 bp Feature: gene Location: 2857-4890 bp Feature: domain Description: Bac_Flav_CT_G Location: 2860-4885 bp Feature: domain Description: Bac_Flav_CT_G Location: 2860-4885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)