myRT

myRT report for GCA_009719425.1_ASM971942v1

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Seq: WNCI01000105.1 Parasutterella excrementihominis strain BIOML-A5 scaffold105_size5294, whole genome shotgun sequence (5294 bp)
Overview 1 RT 1: 2494-4640 bp Neighborhood of RT #1 [2494, 4804] RVT-GII GIIM Feature: gene Location: 2494-2769 bp Feature: gene Location: 2849-3076 bp Feature: gene Location: 3473-4804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3695-4322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3695-4322 bp Feature: domain Description: GIIM Note: maturase Location: 4409-4640 bp Feature: domain Description: GIIM Note: maturase Location: 4409-4640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCI01000112.1 Parasutterella excrementihominis strain BIOML-A5 scaffold112_size2654, whole genome shotgun sequence (2654 bp)
Overview 1 RT 1: 17-2185 bp Neighborhood of RT #1 [17, 2652] RVT-DGRs FGE-sulfatase Feature: gene Location: 17-1294 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 458-1082 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 458-1082 bp Feature: gene Location: 1309-1461 bp Feature: gene Location: 1708-2652 bp Feature: domain Description: FGE-sulfatase Location: 1864-2185 bp Feature: domain Description: FGE-sulfatase Location: 1864-2 185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), RVT-DGRs

Seq: WNCI01000127.1 Parasutterella excrementihominis strain BIOML-A5 scaffold127_size1909, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 1-1636 bp Neighborhood of RT #1 [1, 1803] RVT-GII GIIM Feature: gene Location: 1-240 bp Feature: gene Location: 412-1803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 9-13 63 bp Feature: domain Description: GIIM Note: maturase Location: 1426-1636 bp Feature: domain Description: GIIM Note: maturase Location: 1426-163 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCI01000128.1 Parasutterella excrementihominis strain BIOML-A5 scaffold128_size1909, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 106-1906 bp Neighborhood of RT #1 [106, 1906] RVT-GII GIIM Feature: gene Location: 106-1497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 33-1057 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1330 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1330 bp Feature: gene Location: 1727-1906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCI01000015.1 Parasutterella excrementihominis strain BIOML-A5 scaffold15_size49547, whole genome shotgun sequence (49547 bp)
Overview 1 RT 1: 12642-18888 bp Neighborhood of RT #1 [12642, 18893] cysS RVT-GII GIIM M20_Acy1_IAAspH DcuC Feature: gene Location: 12642-14036 bp Feature: domain Description: cysS Location: 12645-14031 bp Feature: domain Description: cysS Location: 12645 -14031 bp Feature: gene Location: 14268-14474 bp Feature: gene Location: 14600-15883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14834-15452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14834-15 45 2 bp Feature: domain Description: GIIM Note: maturase Location: 15500-15728 bp Feature: domain Description: GIIM Note: maturase Location: 15 5 00-15 728 bp Feature: gene Location: 16093-17385 bp Feature: domain Description: M20_Acy1_IAAspH Location: 16126-17356 bp Feature: domain Description: M20_Acy1_IAAspH Location: 16126-1735 6 bp Feature: gene Location: 17634-18893 bp Feature: domain Description: DcuC Location: 17661-18888 bp Feature: domain Description: DcuC Location: 17661-18888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cysS (TIGR00435), RVT-GII, GIIM (pfam08388), M20_Acy1_IAAspH (cd05665), DcuC (TIGR00771)

Seq: WNCI01000004.1 Parasutterella excrementihominis strain BIOML-A5 scaffold4_size160470, whole genome shotgun sequence (161076 bp)
Overview 1 RT 1: 114426-120156 bp Neighborhood of RT #1 [114426, 120156] PRK09412 group_II_RT_mat group_II_RT_mat RVT-GII GIIM Feature: gene Location: 114426-115871 bp Feature: domain Description: PRK09412 Location: 114549-115863 bp Feature: domain Description: PRK09412 Location: 114549-11586 3 bp Feature: gene Location: 115905-116894 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 115932-116265 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 115932-116 26 5 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 116469-116709 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 116 46 9-116 709 bp Feature: gene Location: 117002-118453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117329-117953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117329-117953 bp Feature: domain Description: GIIM Note: maturase Location: 118016-118226 bp Feature: domain Description: GIIM Note: maturase Location: 118016 -118226 bp Feature: gene Location: 118706-118939 bp Feature: gene Location: 119524-120156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09412 (anaerobic C4-dicarboxylate transporter; Reviewed), group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)

Seq: WNCI01000056.1 Parasutterella excrementihominis strain BIOML-A5 scaffold56_size13807, whole genome shotgun sequence (13807 bp)
Overview 1 RT 1: 69-4564 bp Neighborhood of RT #1 [69, 4914] AAA_23 RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD AAA_15 TOPRIM_OLD Feature: gene Location: 69-455 bp Feature: domain Description: AAA_23 Location: 207-426 bp Feature: domain Description: AAA_23 Location: 207 -426 bp Feature: gene Location: 457-1383 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 559-1150 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 559-1150 bp Feature: gene Location: 1755-3272 bp Feature: domain Description: DEXQc_UvrD Location: 1788-2007 bp Feature: domain Description: DEXQc_UvrD Location: 17 88-2007 bp Feature: domain Description: DEXQc_UvrD Location: 2043-2256 bp Feature: domain Description: DEXQc_UvrD Location: 2043-2256 bp Feature: domain Description: UvrD Location: 2733-3231 bp Feature: domain Description: UvrD Location: 27 33-3231 bp Feature: gene Location: 3265-4914 bp Feature: domain Description: AAA_15 Location: 3274-4207 bp Feature: domain Description: AAA_15 Location: 327 4-4207 bp Feature: domain Description: TOPRIM_OLD Location: 4330-4564 bp Feature: domain Description: TOPRIM_OLD Location: 4330-4564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), UvrD (COG0210), AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons, AAA_23 (pfam13476)

Seq: WNCI01000087.1 Parasutterella excrementihominis strain BIOML-A5 scaffold87_size5601, whole genome shotgun sequence (5601 bp)
Overview 1 RT 1: 52-4882 bp Neighborhood of RT #1 [52, 4887] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 52-522 bp Feature: domain Description: Bac_Flav_CT_G Location: 118-499 bp Feature: domain Description: Bac_Flav_CT_G Location: 118 -499 bp Feature: gene Location: 575-2275 bp Feature: RT Description: RVT_N Location: 674-917 bp Feature: RT Description: RVT_N Location: 674-917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962-1610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962-1610 bp Feature: domain Description: GIIM Note: maturase Location: 1661-1895 bp Feature: domain Description: GIIM Note: maturase Location: 1661-18 95 bp Feature: gene Location: 2455-2661 bp Feature: gene Location: 2854-4887 bp Feature: domain Description: Bac_Flav_CT_G Location: 2857-4882 bp Feature: domain Description: Bac_Flav_CT_G Location: 28 57-48 8 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)