myRT

myRT report for GCA_009719505.1_ASM971950v1

Download annotations/find similar RTs

Seq: WNCL01000116.1 Parasutterella excrementihominis strain BIOML-A2 scaffold116_size1910, whole genome shotgun sequence (1910 bp)
Overview 1 RT 1: 106-1908 bp Neighborhood of RT #1 [106, 1908] RVT-GII GIIM Feature: gene Location: 106-1497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1 057 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1339 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 20-1 339 bp Feature: gene Location: 1750-1908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCL01000119.1 Parasutterella excrementihominis strain BIOML-A2 scaffold119_size1884, whole genome shotgun sequence (1884 bp)
Overview 1 RT 1: 63-1230 bp Neighborhood of RT #1 [63, 1394] RVT-GII GIIM Feature: gene Location: 63-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 85-912 bp Feature: domain Description: GIIM Note: maturase Location: 999-1230 bp Feature: domain Description: GIIM Note: maturase Location: 999-12 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCL01000133.1 Parasutterella excrementihominis strain BIOML-A2 scaffold133_size1297, whole genome shotgun sequence (1297 bp)
Overview 1 RT 1: 3-1296 bp Neighborhood of RT #1 [3, 1295] RVT-DGRs FI Feature: gene Location: 3-728 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6-516 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6-516 bp Feature: gene Location: 721-1008 bp Feature: gene Location: 1089-1295 bp Feature: domain Description: FI Location: 1092-1296 bp Feature: domain Description: FI Location: 1092-1296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FI (PHA02560), RVT-DGRs

Seq: WNCL01000015.1 Parasutterella excrementihominis strain BIOML-A2 scaffold15_size59878, whole genome shotgun sequence (59878 bp)
Overview 1 RT 1: 22973-29219 bp Neighborhood of RT #1 [22973, 29224] cysS RVT-GII GIIM M20_Acy1_IAAspH DcuC Feature: gene Location: 22973-24367 bp Feature: domain Description: cysS Location: 22976-24362 bp Feature: domain Description: cysS Location: 22976-24 362 bp Feature: gene Location: 24599-24805 bp Feature: gene Location: 24931-26214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25165-25783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25165-25783 bp Feature: domain Description: GIIM Note: maturase Location: 25831-26059 bp Feature: domain Description: GIIM Note: maturase Location: 25831-26059 bp Feature: gene Location: 26424-27716 bp Feature: domain Description: M20_Acy1_IAAspH Location: 26457-27687 bp Feature: domain Description: M20_Acy1_IAAspH Location: 264 57-27687 bp Feature: gene Location: 27965-29224 bp Feature: domain Description: DcuC Location: 27992-29219 bp Feature: domain Description: DcuC Location: 27992-29219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cysS (TIGR00435), RVT-GII, GIIM (pfam08388), M20_Acy1_IAAspH (cd05665), DcuC (TIGR00771)

Seq: WNCL01000033.1 Parasutterella excrementihominis strain BIOML-A2 scaffold33_size29281, whole genome shotgun sequence (29420 bp)
Overview 1 RT 1: 24628-29417 bp Neighborhood of RT #1 [24628, 29417] PRK13553 M20_Acy1_IAAspH RVT-GII GIIM Feature: gene Location: 24628-25470 bp Feature: domain Description: PRK13553 Location: 24715-25378 bp Feature: domain Description: PRK135 5 3 Location: 24715 -25 378 bp Feature: gene Location: 25751-27019 bp Feature: domain Description: M20_Acy1_IAAspH Location: 25772-26999 bp Feature: domain Description: M20_Acy1_IAAspH Location: 25 772-26999 bp Feature: gene Location: 27262-28653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27589-28213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275 89-28213 bp Feature: domain Description: GIIM Note: maturase Location: 28276-28486 bp Feature: domain Description: GIIM Note: maturase Location: 28276-28486 bp Feature: gene Location: 28966-29148 bp Feature: gene Location: 29235-29417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13553 (fumarate reductase cytochrome b subunit), M20_Acy1_IAAspH (cd05665), RVT-GII, GIIM (pfam08388)

Seq: WNCL01000054.1 Parasutterella excrementihominis strain BIOML-A2 scaffold54_size19698, whole genome shotgun sequence (19734 bp)
Overview 1 RT 1: 69-4564 bp Neighborhood of RT #1 [69, 4914] AAA_23 RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD AAA_15 TOPRIM_OLD Feature: gene Location: 69-455 bp Feature: domain Description: AAA_23 Location: 207-426 bp Feature: domain Description: AAA_23 Location: 207-426 bp Feature: gene Location: 457-1383 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 559-1150 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 559-1150 bp Feature: gene Location: 1755-3272 bp Feature: domain Description: DEXQc_UvrD Location: 1788-2007 bp Feature: domain Description: DEXQc_UvrD Location: 1788-2007 bp Feature: domain Description: DEXQc_UvrD Location: 2043-2256 bp Feature: domain Description: DEXQc_UvrD Location: 2043-2256 bp Feature: domain Description: UvrD Location: 2733-3231 bp Feature: domain Description: UvrD Location: 2733-3231 bp Feature: gene Location: 3265-4914 bp Feature: domain Description: AAA_15 Location: 3274-4207 bp Feature: domain Description: AAA_15 Location: 3274-4207 bp Feature: domain Description: TOPRIM_OLD Location: 4330-4564 bp Feature: domain Description: TOPRIM_OLD Location: 4330-456 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), UvrD (COG0210), AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons, AAA_23 (pfam13476)

Seq: WNCL01000084.1 Parasutterella excrementihominis strain BIOML-A2 scaffold84_size5601, whole genome shotgun sequence (5601 bp)
Overview 1 RT 1: 52-4882 bp Neighborhood of RT #1 [52, 4887] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 52-522 bp Feature: domain Description: Bac_Flav_CT_G Location: 118-499 bp Feature: domain Description: Bac_Flav_CT_G Location: 118-499 bp Feature: gene Location: 575-2275 bp Feature: RT Description: RVT_N Location: 674-917 bp Feature: RT Description: RVT_N Location: 67 4-917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962-1610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962-1610 bp Feature: domain Description: GIIM Note: maturase Location: 1661-1895 bp Feature: domain Description: GIIM Note: maturase Location: 1661-1895 bp Feature: gene Location: 2455-2661 bp Feature: gene Location: 2854-4887 bp Feature: domain Description: Bac_Flav_CT_G Location: 2857-4882 bp Feature: domain Description: Bac_Flav_CT_G Location: 2857 -4882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WNCL01000090.1 Parasutterella excrementihominis strain BIOML-A2 scaffold90_size6399, whole genome shotgun sequence (6585 bp)
Overview 1 RT 1: 4287-6312 bp Neighborhood of RT #1 [4287, 6479] RVT-GII GIIM Feature: gene Location: 4287-4514 bp Feature: gene Location: 4689-4916 bp Feature: gene Location: 5088-6479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5415-6039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5415-6039 bp Feature: domain Description: GIIM Note: maturase Location: 6102-6312 bp Feature: domain Description: GIIM Note: maturase Location: 6102-6312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)