myRT

myRT report for GCA_009720835.1_ASM972083v1

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Seq: WNKZ01000117.1 Massilia buxea strain KCTC 52429 NODE_117_length_14314_cov_38.063368_117, whole genome shotgun sequence (14314 bp)
Overview 1 RT 1: 4067-10603 bp Neighborhood of RT #1 [4067, 11553] RVT-Retrons WGR_DNA_ligase HEAT_2 HEAT_2 Feature: gene Location: 4067-4369 bp Feature: gene Location: 4272-4520 bp Feature: gene Location: 4600-6462 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5170-5785 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51 70-5785 bp Feature: gene Location: 6806-8476 bp Feature: gene Location: 8473-11553 bp Feature: domain Description: WGR_DNA_ligase Location: 8491-8713 bp Feature: domain Description: WGR_DNA_ligase Location: 8491 -871 3 bp Feature: domain Description: HEAT_2 Location: 8851-9058 bp Feature: domain Description: HEAT_2 Location: 8851 -9058 bp Feature: domain Description: HEAT_2 Location: 10354-10603 bp Feature: domain Description: HEAT_2 Location: 1 0354-1 0603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646)

Seq: WNKZ01000077.1 Massilia buxea strain KCTC 52429 NODE_77_length_29719_cov_37.699209_77, whole genome shotgun sequence (29719 bp)
Overview 1 RT 1: 453-6002 bp Neighborhood of RT #1 [453, 6337] Lysophospholipase_L1_like PRK11784 RVT-GII PRK10788 Feature: gene Location: 453-1613 bp Feature: domain Description: Lysophospholipase_L1_like Location: 1068-1593 bp Feature: domain Description: Lysophospholipase_L1_like Location: 1068-1593 bp Feature: gene Location: 1621-2688 bp Feature: domain Description: PRK11784 Location: 1663-2599 bp Feature: domain Description: PRK11784 Location: 1663-2 599 bp Feature: gene Location: 3134-3982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3239-3854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 39-3854 bp Feature: gene Location: 3985-4134 bp Feature: gene Location: 4403-6337 bp Feature: domain Description: PRK10788 Location: 4430-6002 bp Feature: domain Description: PRK10788 Location: 4430-6002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11784 (tRNA 2-selenouridine synthase; Provisional), RVT-GII, PRK10788 (periplasmic folding chaperone; Provisional), Lysophospholipase_L1_like (cd01822)