myRT

myRT report for GCA_009721185.1_ASM972118v1

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Seq: WNHV01000006.1 Streptococcus pneumoniae strain pnumococcus38 NODE_6_length_69089_cov_162.376674, whole genome shotgun sequence (69089 bp)
Overview 1 RT 1: 31853-41424 bp Neighborhood of RT #1 [31853, 41462] TraC-F-type PRK06149 Phage_lysozyme2 PRK08581 RVT-GII KOG4768 cas_Csn1 AbiEi_3_N AbiEii Feature: gene Location: 31853-34204 bp Feature: domain Description: TraC-F-type Location: 32342-34028 bp Feature: domain Description: TraC-F-type Location: 32342-34028 bp Feature: gene Location: 34206-36899 bp Feature: domain Description: PRK06149 Location: 35631-35892 bp Feature: domain Description: PRK061 49 Location: 35631 -35892 bp Feature: domain Description: Phage_lysozyme2 Location: 36003-36513 bp Feature: domain Description: Phage_lysozyme2 Location: 36003-3651 3 bp Feature: domain Description: PRK08581 Location: 36633-36882 bp Feature: domain Description: PRK08581 Location: 36633-36882 bp Feature: gene Location: 37608-39530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37935-38670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37935-38670 bp Feature: domain Description: KOG4768 Location: 38817-38922 bp Feature: domain Description: KOG4768 Location: 3881 7-38922 bp Feature: domain Description: cas_Csn1 Location: 39081-39360 bp Feature: domain Description: cas_Csn1 Location: 39081 -39360 bp Feature: gene Location: 39838-40461 bp Feature: domain Description: AbiEi_3_N Location: 39877-40171 bp Feature: domain Description: AbiEi_3_N Location: 39877-401 71 bp Feature: gene Location: 40464-41462 bp Feature: domain Description: AbiEii Location: 40593-41424 bp Feature: domain Description: AbiEii Location: 40593-41 424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), PRK06149 (aminotransferase), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), AbiEi_3_N (pfam17194), AbiEii (pfam08843)

Seq: WNHV01000090.1 Streptococcus pneumoniae strain pnumococcus38 NODE_90_length_2217_cov_165.225234, whole genome shotgun sequence (2217 bp)
Overview 1 RT 1: 126-2014 bp Neighborhood of RT #1 [126, 2205] RVT-GII GIIM Feature: gene Location: 126-365 bp Feature: gene Location: 928-2205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1132-1747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1132 -1747 bp Feature: domain Description: GIIM Note: maturase Location: 1801-2014 bp Feature: domain Description: GIIM Note: maturase Location: 1801-2 014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)