myRT

myRT report for GCA_009721605.1_ASM972160v1

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Seq: WNME01000002.1 Hungatella hathewayi strain 123Y-2 ctg_2, whole genome shotgun sequence (517443 bp)
Overview 1 RT 1: 326238-328914 bp Neighborhood of RT #1 [326238, 328919] Phage_holin_5_2 RVT-DGRs Phage_XkdX Feature: gene Location: 326238-326534 bp Feature: domain Description: Phage_holin_5_2 Location: 326286-326517 bp Feature: domain Description: Phage_holin_5_2 Location: 326286-32651 7 bp Feature: gene Location: 326546-326884 bp Feature: gene Location: 326887-328083 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 327082-327805 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 327082-327805 bp Feature: gene Location: 328294-328779 bp Feature: gene Location: 328776-328919 bp Feature: domain Description: Phage_XkdX Location: 328797-328914 bp Feature: domain Description: Phage_XkdX Location: 328797-32891 4 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WNME01000003.1 Hungatella hathewayi strain 123Y-2 ctg_3, whole genome shotgun sequence (468762 bp)
Overview 1 RT 1: 161254-167040 bp 2 RT 2: 208089-218427 bp Neighborhood of RT #1 [161254, 167087] Acetyltransf_10 RVT-GII Intron_maturas2 Peptidase_A24 pilus_cpaB Neighborhood of RT #2 [208089, 218468] YtxK COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 PTZ00461 SpoVG SpoVG Feature: gene Location: 161254-161985 bp Feature: domain Description: Acetyltransf_10 Location: 161638-161977 bp Feature: domain Description: Acetyltransf_10 Location: 161638-161977 bp Feature: gene Location: 162471-162704 bp Feature: gene Location: 163593-165341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163920-164754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16392 0-164754 bp Feature: domain Description: Intron_maturas2 Location: 164829-165156 bp Feature: domain Description: Intron_maturas2 Location: 16482 9-165156 bp Feature: gene Location: 165693-166100 bp Feature: domain Description: Peptidase_A24 Location: 165723-166005 bp Feature: domain Description: Peptidase_A2 4 Location: 16572 3-166005 bp Feature: gene Location: 166290-167087 bp Feature: domain Description: pilus_cpaB Location: 166386-167040 bp Feature: domain Description: pilus_cpaB Location: 166386-167040 bp Feature: gene Location: 208089-214454 bp Feature: domain Description: YtxK Location: 210690-211368 bp Feature: domain Description: YtxK Location: 2 10690-2 11368 bp Feature: domain Description: COG4646 Location: 211443-214053 bp Feature: domain Description: COG4646 Location: 2 11443-2 14053 bp Feature: gene Location: 214577-214771 bp Feature: gene Location: 215007-216821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 215271-216093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 152 71-2 16093 bp Feature: domain Description: Intron_maturas2 Location: 216165-216591 bp Feature: domain Description: Intron_maturas2 Location: 2 16165-2 16591 bp Feature: domain Description: HNHc Note: nucleases Location: 216648-216792 bp Feature: domain Description: HNHc Note: nucleases Location: 2 16648-2 16792 bp Feature: gene Location: 216881-217825 bp Feature: domain Description: KOG1000 Location: 216929-217106 bp Feature: domain Description: KOG1000 Location: 2 1692 9-2 17106 bp Feature: domain Description: PTZ00461 Location: 217382-217640 bp Feature: domain Description: PTZ00461 Location: 2 17382 -2 17640 bp Feature: gene Location: 217845-218468 bp Feature: domain Description: SpoVG Location: 217863-218118 bp Feature: domain Description: SpoVG Location: 2 17863-2 18118 bp Feature: domain Description: SpoVG Location: 218202-218427 bp Feature: domain Description: SpoVG Location: 2 182 02 -2 1842 7 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WNME01000004.1 Hungatella hathewayi strain 123Y-2 ctg_4, whole genome shotgun sequence (447006 bp)
Overview 1 RT 1: 2-8765 bp 2 RT 2: 16536-22448 bp 3 RT 3: 26156-30788 bp Neighborhood of RT #1 [2, 8956] RVT-GII HNHc COG4646 KOG1000 DUF3991 Toprim_2 Neighborhood of RT #2 [16536, 22480] VirD4 RVT-GII HNHc SpoVG Neighborhood of RT #3 [26156, 31126] RVT-GII HNHc CpaF TadB Feature: gene Location: 2-946 bp Feature: gene Location: 1625-3496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1946-2681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1946-2681 bp Feature: domain Description: HNHc Note: nucleases Location: 3236-3377 bp Feature: domain Description: HNHc Note: nucleases Location: 3 23 6-3 3 77 bp Feature: gene Location: 3766-7935 bp Feature: domain Description: COG4646 Location: 3931-6625 bp Feature: domain Description: COG4646 Location: 3 93 1-6625 bp Feature: domain Description: KOG1000 Location: 6895-7195 bp Feature: domain Description: KOG1000 Location: 6895-7195 bp Feature: gene Location: 7946-8956 bp Feature: domain Description: DUF3991 Location: 8327-8540 bp Feature: domain Description: DUF3 991 Location: 83 27-8540 bp Feature: domain Description: Toprim_2 Location: 8585-8765 bp Feature: domain Description: Toprim_2 Location: 8585-8765 bp Feature: gene Location: 16536-18788 bp Feature: domain Description: VirD4 Location: 17265-18504 bp Feature: domain Description: VirD4 Location: 17265-18504 bp Feature: gene Location: 18760-19044 bp Feature: gene Location: 19799-21670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20114-20840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20114-20840 bp Feature: domain Description: HNHc Note: nucleases Location: 21392-21560 bp Feature: domain Description: HNHc Note: nucleases Location: 213 92-21560 bp Feature: gene Location: 21931-22182 bp Feature: gene Location: 22196-22480 bp Feature: domain Description: SpoVG Location: 22223-22448 bp Feature: domain Description: SpoVG Location: 22223 -22448 bp Feature: gene Location: 26156-26482 bp Feature: gene Location: 26573-26713 bp Feature: gene Location: 27216-29042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27531-28230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2753 1-2823 0 bp Feature: domain Description: HNHc Note: nucleases Location: 28779-28920 bp Feature: domain Description: HNHc Note: nucleases Location: 28779-28920 bp Feature: gene Location: 29091-30197 bp Feature: domain Description: CpaF Location: 29151-30048 bp Feature: domain Description: CpaF Location: 29151-3 0048 bp Feature: gene Location: 30194-31126 bp Feature: domain Description: TadB Location: 30350-30788 bp Feature: domain Description: TadB Location: 3 03 50-3 0788 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WNME01000052.1 Hungatella hathewayi strain 123Y-2 ctg_52, whole genome shotgun sequence (2525 bp)
Overview 1 RT 1: 117-2186 bp Neighborhood of RT #1 [117, 2186] RVT-GII Intron_maturas2 Feature: gene Location: 117-1934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1212 bp Feature: domain Description: Intron_maturas2 Location: 1284-1590 bp Feature: domain Description: Intron_maturas2 Location: 1284 -1590 bp Feature: gene Location: 1992-2186 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WNME01000006.1 Hungatella hathewayi strain 123Y-2 ctg_6, whole genome shotgun sequence (306746 bp)
Overview 1 RT 1: 80362-86141 bp Neighborhood of RT #1 [80362, 86230] PRK06545 PRK14806 RVT-Retrons GDE_C GDE_N Feature: gene Location: 80362-81462 bp Feature: domain Description: PRK06545 Location: 80377-81433 bp Feature: domain Description: PRK065 45 Location: 80377-81433 bp Feature: gene Location: 81479-82756 bp Feature: domain Description: PRK14806 Location: 81491-82733 bp Feature: domain Description: PRK14806 Location: 81491-82733 bp Feature: gene Location: 82871-83884 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83036-83591 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83036-835 91 bp Feature: gene Location: 84251-85375 bp Feature: domain Description: GDE_C Location: 84266-85340 bp Feature: domain Description: GDE_C Location: 84266-85 340 bp Feature: gene Location: 85448-86230 bp Feature: domain Description: GDE_N Location: 85511-86141 bp Feature: domain Description: GDE_N Location: 85 5 11-86141 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WNME01000063.1 Hungatella hathewayi strain 123Y-2 ctg_63, whole genome shotgun sequence (875 bp)
Overview 1 RT 1: 1-874 bp Neighborhood of RT #1 [1, 874] RVT-GII Feature: gene Location: 1-528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 316-529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 316 -529 bp Feature: gene Location: 743-874 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WNME01000067.1 Hungatella hathewayi strain 123Y-2 ctg_67, whole genome shotgun sequence (685 bp)
Overview 1 RT 1: 6-558 bp Neighborhood of RT #1 [6, 683] RVT-GII GIIM Feature: gene Location: 6-683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-288 bp Feature: domain Description: GIIM Note: maturase Location: 342-558 bp Feature: domain Description: GIIM Note: maturase Location: 342-558 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WNME01000009.1 Hungatella hathewayi strain 123Y-2 ctg_9, whole genome shotgun sequence (229576 bp)
Overview 1 RT 1: 15362-22322 bp Neighborhood of RT #1 [15362, 22322] DDE_Tnp_1_6 COG3666 RVT-GII GIIM Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII Feature: gene Location: 15362-16237 bp Feature: domain Description: DDE_Tnp_1_6 Location: 15845-16196 bp Feature: domain Description: DDE_Tnp_1_6 Location: 158 45-16196 bp Feature: gene Location: 16292-16765 bp Feature: domain Description: COG3666 Location: 16316-16751 bp Feature: domain Description: COG3666 Location: 16316-16751 bp Feature: gene Location: 16868-17530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16871-17078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168 71-17078 bp Feature: domain Description: GIIM Note: maturase Location: 17138-17357 bp Feature: domain Description: GIIM Note: maturase Location: 17138 -17357 bp Feature: gene Location: 17701-18936 bp Feature: domain Description: Phage_int_SAM_1 Location: 18073-18289 bp Feature: domain Description: Phage_int_SAM_1 Location: 18 073-18 28 9 bp Feature: domain Description: INT_RitA_C_like Location: 18370-18901 bp Feature: domain Description: INT_RitA_C_like Location: 18 370-18 901 bp Feature: gene Location: 18968-19909 bp Feature: domain Description: INT_RitB_C_like Location: 19265-19844 bp Feature: domain Description: INT_RitB_C_like Location: 19265-198 44 bp Feature: gene Location: 19896-20906 bp Feature: domain Description: Phage_int_SAM_1 Location: 19941-20193 bp Feature: domain Description: Phage_int_SAM_1 Location: 19941-20193 bp Feature: domain Description: INT_RitC_C_like Location: 20274-20826 bp Feature: domain Description: INT_RitC_C_like Location: 20274-208 26 bp Feature: gene Location: 21017-21682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21290-21671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21290-21671 bp Feature: gene Location: 21765-21896 bp Feature: gene Location: 22167-22322 bp Sorry, your browser does not support inline SVG.
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