myRT

myRT report for GCA_009724245.1_ASM972424v1

Download annotations/find similar RTs

Seq: WNNK01000013.1 Pseudomonas sp. CCM 7893 Pseudomonas_CCM7893_cont13_195717nt_UniDepth_1.02x, whole genome shotgun sequence (195717 bp)
Overview 1 RT 1: 110089-119231 bp Neighborhood of RT #1 [110089, 119231] HTH_XRE ImmA KAP_NTPase RVT-UG5 nitrilase PRK09692 Feature: gene Location: 110089-111240 bp Feature: domain Description: HTH_XRE Location: 110110-110266 bp Feature: domain Description: HTH_XRE Location: 1 1 01 1 0-1 1 0266 bp Feature: domain Description: ImmA Location: 110524-111055 bp Feature: domain Description: ImmA Location: 1 1 0524-1 1 1 055 bp Feature: gene Location: 111299-113584 bp Feature: domain Description: KAP_NTPase Location: 111467-112199 bp Feature: domain Description: KAP_NTPase Location: 1 1 1 467-1 1 21 99 bp Feature: gene Location: 113668-116682 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 114145-114640 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 1 41 45-1 1 4640 bp Feature: domain Description: nitrilase Location: 115888-116578 bp Feature: domain Description: nitrilase Location: 1 1 5888-1 1 6578 bp Feature: gene Location: 116924-118192 bp Feature: domain Description: PRK09692 Location: 116939-118160 bp Feature: domain Description: PRK09692 Location: 1 1 6939-1 1 81 60 bp Feature: gene Location: 118866-119231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), ImmA (COG2856), KAP_NTPase (pfam07693), RVT-UG5, nitrilase (cl11424), PRK09692 (Integrase; provisional)

Seq: WNNK01000045.1 Pseudomonas sp. CCM 7893 Pseudomonas_CCM7893_cont45_21725nt_UniDepth_1.03x, whole genome shotgun sequence (21725 bp)
Overview 1 RT 1: 18761-21713 bp Neighborhood of RT #1 [18761, 21724] RVT-GII GIIM TonB-hemin Feature: gene Location: 18761-19096 bp Feature: gene Location: 19257-19412 bp Feature: gene Location: 19556-21001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19937-20552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19937-2 0552 bp Feature: domain Description: GIIM Note: maturase Location: 20606-20822 bp Feature: domain Description: GIIM Note: maturase Location: 2 0606-2 082 2 bp Feature: gene Location: 21278-21724 bp Feature: domain Description: TonB-hemin Location: 21284-21713 bp Feature: domain Description: TonB-hemin Location: 2 12 84-2 1713 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TonB-hemin (TIGR01785)

Seq: WNNK01000062.1 Pseudomonas sp. CCM 7893 Pseudomonas_CCM7893_cont62_1922nt_UniDepth_2.20x, whole genome shotgun sequence (1922 bp)
Overview 1 RT 1: 98-1472 bp Neighborhood of RT #1 [98, 1864] RVT-GII Feature: gene Location: 98-1864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 782-1472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 782-1472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII