myRT

myRT report for GCA_009725235.1_ASM972523v1

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Seq: WJFC01000002.1 Scytonema sp. UIC 10036 c00008_NODE_8_.., whole genome shotgun sequence (214895 bp)
Overview 1 RT 1: 117595-123402 bp Neighborhood of RT #1 [117595, 123434] RVT_N RVT-GII RVT-GII Intron_maturas2 HNHc RVT-GII McrA RHH_5 Uma2 Feature: gene Location: 117595-117768 bp Feature: gene Location: 117791-117985 bp Feature: gene Location: 118272-118859 bp Feature: domain Description: RVT_N Location: 118308-118554 bp Feature: domain Description: RVT_N Location: 1 1 8308-1 1 8554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118605-118845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 8605-1 1 8845 bp Feature: gene Location: 119350-121134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119611-120406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 961 1 -1 20406 bp Feature: domain Description: Intron_maturas2 Location: 120508-120745 bp Feature: domain Description: Intron_maturas2 Location: 1 20508-1 20745 bp Feature: domain Description: HNHc Note: nucleases Location: 120925-121090 bp Feature: domain Description: HNHc Note: nucleases Location: 1 20925-1 21 090 bp Feature: gene Location: 121271-122227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121283-121643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 283-1 21 643 bp Feature: domain Description: McrA Location: 121874-122198 bp Feature: domain Description: McrA Location: 1 21 874-1 221 98 bp Feature: gene Location: 122611-122781 bp Feature: domain Description: RHH_5 Location: 122629-122740 bp Feature: domain Description: RHH_5 Location: 1 22629-1 22740 bp Feature: gene Location: 122811-123434 bp Feature: domain Description: Uma2 Location: 122844-123402 bp Feature: domain Description: Uma2 Location: 1 22844-1 23402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), McrA (COG4058), RHH_5 (pfam07878), Uma2 (pfam05685)

Seq: WJFC01000019.1 Scytonema sp. UIC 10036 c00039_NODE_39.., whole genome shotgun sequence (103514 bp)
Overview 1 RT 1: 48231-56999 bp Neighborhood of RT #1 [48231, 57223] Avd_like RVT_N RVT-GII RVT-GII Intron_maturas2 HNHc RVT-GII McrA COG3825 YfmG MoxR Feature: gene Location: 48231-48482 bp Feature: domain Description: Avd_like Location: 48282-48399 bp Feature: domain Description: Avd_like Location: 482 82 -48399 bp Feature: gene Location: 48501-48707 bp Feature: gene Location: 48999-49580 bp Feature: domain Description: RVT_N Location: 49035-49269 bp Feature: domain Description: RVT_N Location: 49035-492 69 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49326-49566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4932 6-49566 bp Feature: gene Location: 49552-49743 bp Feature: gene Location: 50071-51855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50332-51127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50332 -5112 7 bp Feature: domain Description: Intron_maturas2 Location: 51229-51466 bp Feature: domain Description: Intron_maturas2 Location: 512 2 9-51466 bp Feature: domain Description: HNHc Note: nucleases Location: 51646-51811 bp Feature: domain Description: HNHc Note: nucleases Location: 51646-51811 bp Feature: gene Location: 51992-52963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52001-52385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 001-52 385 bp Feature: domain Description: McrA Location: 52622-52940 bp Feature: domain Description: McrA Location: 52 62 2 -52 940 bp Feature: gene Location: 53330-56113 bp Feature: domain Description: COG3825 Location: 53702-53864 bp Feature: domain Description: COG382 5 Location: 53702 -53864 bp Feature: domain Description: YfmG Location: 55286-56087 bp Feature: domain Description: YfmG Location: 552 86-56087 bp Feature: gene Location: 56129-57223 bp Feature: domain Description: MoxR Location: 56351-56999 bp Feature: domain Description: MoxR Location: 56351-56999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT_N (pfam13655), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), McrA (COG4058), COG3825 (CoxE;Uncharacterized conserved protein, contains von Willebrand factor type A (vWA) domain ), YfmG (COG1262), MoxR (COG0714)

Seq: WJFC01000020.1 Scytonema sp. UIC 10036 c00040_NODE_40.., whole genome shotgun sequence (103289 bp)
Overview 1 RT 1: 1894-14699 bp Neighborhood of RT #1 [1894, 14755] YfmG Avd_like RVT-DGRs YfmG RVT_N RVT-GII RVT-GII Intron_maturas2 HNHc RVT-GII GIIM McrA XerD Feature: gene Location: 1894-4464 bp Feature: domain Description: YfmG Location: 3550-4444 bp Feature: domain Description: YfmG Location: 3 550-4444 bp Feature: gene Location: 5143-5499 bp Feature: domain Description: Avd_like Location: 5161-5467 bp Feature: domain Description: Avd_like Location: 5161-5467 bp Feature: gene Location: 5607-6665 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5820-6459 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5820-6459 bp Feature: gene Location: 6687-6929 bp Feature: domain Description: YfmG Location: 6693-6798 bp Feature: domain Description: YfmG Location: 6693 -6798 bp Feature: gene Location: 7107-7241 bp Feature: gene Location: 8148-8444 bp Feature: gene Location: 8896-9141 bp Feature: gene Location: 9194-9823 bp Feature: domain Description: RVT_N Location: 9290-9536 bp Feature: domain Description: RVT_N Location: 9290-953 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9578-9809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9578-9809 bp Feature: gene Location: 9786-9986 bp Feature: gene Location: 10314-12098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10575-11370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10575-113 70 bp Feature: domain Description: Intron_maturas2 Location: 11472-11709 bp Feature: domain Description: Intron_maturas2 Location: 11472-11709 bp Feature: domain Description: HNHc Note: nucleases Location: 11889-12054 bp Feature: domain Description: HNHc Note: nucleases Location: 11889-12054 bp Feature: gene Location: 12232-13395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12235-12619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1223 5-12619 bp Feature: domain Description: GIIM Note: maturase Location: 12724-12949 bp Feature: domain Description: GIIM Note: maturase Location: 12724-12949 bp Feature: domain Description: McrA Location: 13000-13321 bp Feature: domain Description: McrA Location: 13 000-13 3 21 bp Feature: gene Location: 13443-13649 bp Feature: gene Location: 13694-14755 bp Feature: domain Description: XerD Location: 13772-14699 bp Feature: domain Description: XerD Location: 13 772-14699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Avd_like (cd16376), RVT-DGRs, RVT_N (pfam13655), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), GIIM (pfam08388), McrA (COG4058), XerD (COG4974)

Seq: WJFC01000022.1 Scytonema sp. UIC 10036 c00042_NODE_42.., whole genome shotgun sequence (101558 bp)
Overview 1 RT 1: 49508-55023 bp Neighborhood of RT #1 [49508, 55023] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 49508-49933 bp Feature: gene Location: 49946-50476 bp Feature: gene Location: 51078-52796 bp Feature: domain Description: RVT_N Location: 51132-51375 bp Feature: domain Description: RVT_N Location: 51132-51375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51426-52095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514 26-52095 bp Feature: domain Description: GIIM Note: maturase Location: 52155-52380 bp Feature: domain Description: GIIM Note: maturase Location: 52155-52380 bp Feature: domain Description: HNHc Note: nucleases Location: 52602-52761 bp Feature: domain Description: HNHc Note: nucleases Location: 52602-52761 bp Feature: gene Location: 52711-53073 bp Feature: gene Location: 53089-55023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: WJFC01000023.1 Scytonema sp. UIC 10036 c00044_NODE_44.., whole genome shotgun sequence (99953 bp)
Overview 1 RT 1: 80854-94920 bp Neighborhood of RT #1 [80854, 94920] WGR_DNA_ligase HEAT_2 RVT-Retrons pfam13191 Helicase_C Feature: gene Location: 80854-84069 bp Feature: domain Description: WGR_DNA_ligase Location: 80869-81091 bp Feature: domain Description: WGR_DNA_ligase Location: 80869-81091 bp Feature: domain Description: HEAT_2 Location: 81181-81430 bp Feature: domain Description: HEAT_2 Location: 81181-81430 bp Feature: gene Location: 84151-85791 bp Feature: gene Location: 86029-87483 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86635-87253 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86635 -8725 3 bp Feature: gene Location: 87542-91390 bp Feature: domain Description: pfam13191 Location: 88946-89138 bp Feature: domain Description: pfam13191 Location: 88946-89138 bp Feature: domain Description: Helicase_C Location: 90005-90302 bp Feature: domain Description: Helicase_C Location: 90005 -90302 bp Feature: gene Location: 91414-94920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646), RVT-Retrons, pfam13191 (AAA_16;AAA ATPase domain), Helicase_C (pfam00271)

Seq: WJFC01000025.1 Scytonema sp. UIC 10036 c00046_NODE_46.., whole genome shotgun sequence (98926 bp)
Overview 1 RT 1: 56132-61544 bp Neighborhood of RT #1 [56132, 61544] groEL groES RVT-GII Intron_maturas2 HNHc Feature: gene Location: 56132-57772 bp Feature: domain Description: groEL Location: 56135-57710 bp Feature: domain Description: groEL Location: 56 135-57710 bp Feature: gene Location: 57855-58166 bp Feature: domain Description: groES Location: 57885-58161 bp Feature: domain Description: groES Location: 57885-5816 1 bp Feature: gene Location: 58937-60721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59198-59993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59198-59993 bp Feature: domain Description: Intron_maturas2 Location: 60095-60332 bp Feature: domain Description: Intron_maturas2 Location: 6 0095-6 0332 bp Feature: domain Description: HNHc Note: nucleases Location: 60512-60677 bp Feature: domain Description: HNHc Note: nucleases Location: 6 0512-6 06 77 bp Feature: gene Location: 60952-61167 bp Feature: gene Location: 61212-61544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), groES (PRK14533), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WJFC01000031.1 Scytonema sp. UIC 10036 c00054_NODE_54.., whole genome shotgun sequence (89562 bp)
Overview 1 RT 1: 55373-66825 bp Neighborhood of RT #1 [55373, 66825] tand_rpt_95 Cadherin_repeat He_PIG He_PIG He_PIG He_PIG vWFA SdrD_B He_PIG He_PIG RVT-GII RVT-GII McrA RVT-GII Intron_maturas2 HNHc RVT_N RVT-GII Feature: gene Location: 55373-60280 bp Feature: domain Description: tand_rpt_95 Location: 56333-56477 bp Feature: domain Description: tand_rpt_95 Location: 56333-5647 7 bp Feature: domain Description: Cadherin_repeat Location: 56534-56795 bp Feature: domain Description: Cadherin_repeat Location: 56534-567 95 bp Feature: domain Description: He_PIG Location: 56921-57023 bp Feature: domain Description: He_PIG Location: 56921-57 023 bp Feature: domain Description: He_PIG Location: 58010-58115 bp Feature: domain Description: He_PIG Location: 58010-58115 bp Feature: domain Description: He_PIG Location: 58274-58400 bp Feature: domain Description: He_PIG Location: 5827 4-58400 bp Feature: domain Description: He_PIG Location: 58556-58673 bp Feature: domain Description: He_PIG Location: 58556-5867 3 bp Feature: domain Description: vWFA Location: 58802-59345 bp Feature: domain Description: vWFA Location: 58802-59345 bp Feature: domain Description: SdrD_B Location: 59417-59630 bp Feature: domain Description: SdrD_B Location: 59417 -59630 bp Feature: domain Description: He_PIG Location: 59837-59939 bp Feature: domain Description: He_PIG Location: 59837 -59939 bp Feature: domain Description: He_PIG Location: 60125-60212 bp Feature: domain Description: He_PIG Location: 60125-60212 bp Feature: gene Location: 60511-61260 bp Feature: gene Location: 62202-63116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62214-62364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62214-62364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62364-62532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62364-62532 bp Feature: domain Description: McrA Location: 62763-63087 bp Feature: domain Description: McrA Location: 627 63-63087 bp Feature: gene Location: 63253-65037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63514-64309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63514-64309 bp Feature: domain Description: Intron_maturas2 Location: 64411-64648 bp Feature: domain Description: Intron_maturas2 Location: 64411-64648 bp Feature: domain Description: HNHc Note: nucleases Location: 64828-64993 bp Feature: domain Description: HNHc Note: nucleases Location: 64828-64993 bp Feature: gene Location: 65268-65483 bp Feature: gene Location: 65528-66115 bp Feature: domain Description: RVT_N Location: 65564-65810 bp Feature: domain Description: RVT_N Location: 65564-65810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65861-66101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65861-66101 bp Feature: gene Location: 66402-66596 bp Feature: gene Location: 66619-66825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tand_rpt_95 (NF012211), Cadherin_repeat (cd11304), He_PIG (pfam05345), vWFA (cl00057), SdrD_B (pfam17210), RVT-GII, McrA (COG4058), Intron_maturas2 (pfam01348), HNHc (smart00507), RVT_N (pfam13655)

Seq: WJFC01000052.1 Scytonema sp. UIC 10036 c00087_NODE_87.., whole genome shotgun sequence (69528 bp)
Overview 1 RT 1: 34843-40899 bp Neighborhood of RT #1 [34843, 40901] groEL RVT_N RVT-GII GIIM McrA GT_WecA_like fabG Feature: gene Location: 34843-36507 bp Feature: domain Description: groEL Location: 34846-36472 bp Feature: domain Description: groEL Location: 348 46-36472 bp Feature: gene Location: 36699-36950 bp Feature: gene Location: 37533-38777 bp Feature: domain Description: RVT_N Location: 37641-37755 bp Feature: domain Description: RVT_N Location: 37641-37755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37770-37986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37770-3798 6 bp Feature: domain Description: GIIM Note: maturase Location: 38073-38298 bp Feature: domain Description: GIIM Note: maturase Location: 38 073-38 298 bp Feature: domain Description: McrA Location: 38388-38715 bp Feature: domain Description: McrA Location: 38 38 8 -38 715 bp Feature: gene Location: 38944-40023 bp Feature: domain Description: GT_WecA_like Location: 39115-39862 bp Feature: domain Description: GT_WecA_like Location: 39115-398 62 bp Feature: gene Location: 40140-40901 bp Feature: domain Description: fabG Location: 40170-40899 bp Feature: domain Description: fabG Location: 40170-408 99 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), GT_WecA_like (cd06853), fabG (PRK12825)

Seq: WJFC01000054.1 Scytonema sp. UIC 10036 c00091_NODE_91.., whole genome shotgun sequence (68271 bp)
Overview 1 RT 1: 50144-57318 bp Neighborhood of RT #1 [50144, 57338] RVT_N RVT-GII RVT-GII Intron_maturas2 HNHc RVT-GII GIIM McrA RRXRR HNHc glut_syn Feature: gene Location: 50144-50371 bp Feature: gene Location: 50546-50704 bp Feature: gene Location: 50722-51309 bp Feature: domain Description: RVT_N Location: 50758-51004 bp Feature: domain Description: RVT_N Location: 50758-51004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51055-51295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51055-5129 5 bp Feature: gene Location: 51329-51472 bp Feature: gene Location: 51800-53584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52061-52856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52061-52856 bp Feature: domain Description: Intron_maturas2 Location: 52958-53195 bp Feature: domain Description: Intron_maturas2 Location: 529 58-5319 5 bp Feature: domain Description: HNHc Note: nucleases Location: 53375-53540 bp Feature: domain Description: HNHc Note: nucleases Location: 53375-53540 bp Feature: gene Location: 53721-54677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53733-54093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53733-5409 3 bp Feature: domain Description: GIIM Note: maturase Location: 54150-54339 bp Feature: domain Description: GIIM Note: maturase Location: 54150-54339 bp Feature: domain Description: McrA Location: 54354-54648 bp Feature: domain Description: McrA Location: 54354-54648 bp Feature: gene Location: 54778-56196 bp Feature: domain Description: RRXRR Location: 54847-55402 bp Feature: domain Description: RRXRR Location: 54847-55402 bp Feature: domain Description: HNHc Note: nucleases Location: 55420-55582 bp Feature: domain Description: HNHc Note: nucleases Location: 55420-55582 bp Feature: gene Location: 56355-57338 bp Feature: domain Description: glut_syn Location: 56358-57318 bp Feature: domain Description: glut_syn Location: 56358-57318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), GIIM (pfam08388), McrA (COG4058), RRXRR (pfam14239), glut_syn (TIGR01380)

Seq: WJFC01000059.1 Scytonema sp. UIC 10036 c00099_NODE_99.., whole genome shotgun sequence (65403 bp)
Overview 1 RT 1: 983-16063 bp Neighborhood of RT #1 [983, 16161] RVT_N RVT_N RVT-GII RVT-GII McrA RVT_N RVT-GII GIIM HNHc RVT-GII RVT-GII RVT-GII GIIM McrA PRK09533 NB-ARC KOG0266 WD40 WD40 KOG0266 WD40 WD40 WD40 KOG0266 Feature: gene Location: 983-1216 bp Feature: gene Location: 2389-2724 bp Feature: domain Description: RVT_N Location: 2470-2614 bp Feature: domain Description: RVT_N Location: 2470-2614 bp Feature: gene Location: 3148-3735 bp Feature: domain Description: RVT_N Location: 3184-3430 bp Feature: domain Description: RVT_N Location: 3184-3430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481-3721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481-3721 bp Feature: gene Location: 4111-4290 bp Feature: gene Location: 4387-5301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4396-4717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4396-4717 bp Feature: domain Description: McrA Location: 4957-5272 bp Feature: domain Description: McrA Location: 4957-5272 bp Feature: gene Location: 5971-7776 bp Feature: domain Description: RVT_N Location: 6100-6346 bp Feature: domain Description: RVT_N Location: 610 0-6346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6394-7075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6394-7075 bp Feature: domain Description: GIIM Note: maturase Location: 7126-7360 bp Feature: domain Description: GIIM Note: maturase Location: 7126-7360 bp Feature: domain Description: HNHc Note: nucleases Location: 7588-7744 bp Feature: domain Description: HNHc Note: nucleases Location: 7588-7744 bp Feature: gene Location: 7782-8210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7965-8196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7965-8196 bp Feature: gene Location: 8701-9624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8962-9607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8962-9607 bp Feature: gene Location: 9658-9837 bp Feature: gene Location: 10080-10262 bp Feature: gene Location: 10318-11205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10324-10414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10 324-10 414 bp Feature: domain Description: GIIM Note: maturase Location: 10501-10726 bp Feature: domain Description: GIIM Note: maturase Location: 10 501-10 726 bp Feature: domain Description: McrA Location: 10816-11149 bp Feature: domain Description: McrA Location: 10 816-11149 bp Feature: gene Location: 11353-12435 bp Feature: domain Description: PRK09533 Location: 11356-12430 bp Feature: domain Description: PRK09533 Location: 11356-12430 bp Feature: gene Location: 12454-16161 bp Feature: domain Description: NB-ARC Location: 12931-13570 bp Feature: domain Description: NB-ARC Location: 12931-13570 bp Feature: domain Description: KOG0266 Location: 14242-14614 bp Feature: domain Description: KOG0266 Location: 14242-14614 bp Feature: domain Description: WD40 Location: 14614-14728 bp Feature: domain Description: WD40 Location: 14614-14728 bp Feature: domain Description: WD40 Location: 14740-14854 bp Feature: domain Description: WD40 Location: 14740-14854 bp Feature: domain Description: KOG0266 Location: 14899-15418 bp Feature: domain Description: KOG0266 Location: 14899-15418 bp Feature: domain Description: WD40 Location: 15427-15526 bp Feature: domain Description: WD40 Location: 15427-15526 bp Feature: domain Description: WD40 Location: 15541-15652 bp Feature: domain Description: WD40 Location: 15541-15652 bp Feature: domain Description: WD40 Location: 15661-15778 bp Feature: domain Description: WD40 Location: 15661-15778 bp Feature: domain Description: KOG0266 Location: 15808-16063 bp Feature: domain Description: KOG0266 Location: 15808-16063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058), GIIM (pfam08388), HNHc (smart00507), PRK09533 (bifunctional transaldolase/phosoglucose isomerase; Validated), NB-ARC (pfam00931), KOG0266 (KOG0266, WD40 repeat-containing protein ), WD40 (smart00320)

Seq: WJFC01000065.1 Scytonema sp. UIC 10036 c00110_NODE_11.., whole genome shotgun sequence (61851 bp)
Overview 1 RT 1: 60191-61723 bp Neighborhood of RT #1 [60191, 61749] RVT-GII McrA Feature: gene Location: 60191-60337 bp Feature: gene Location: 60417-60620 bp Feature: gene Location: 60787-61749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60799-61162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60799-611 62 bp Feature: domain Description: McrA Location: 61396-61723 bp Feature: domain Description: McrA Location: 61396-61723 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, McrA (COG4058)

Seq: WJFC01000098.1 Scytonema sp. UIC 10036 c00159_NODE_15.., whole genome shotgun sequence (46116 bp)
Overview 1 RT 1: 22862-26384 bp Neighborhood of RT #1 [22862, 26476] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR SpoT Feature: gene Location: 22862-23137 bp Feature: domain Description: Cas2_I_II_III Location: 22871-23099 bp Feature: domain Description: Cas2_I_II_III Location: 22871-23099 bp Feature: gene Location: 23138-24256 bp Feature: domain Description: Cas1_I-II-III Location: 23264-24218 bp Feature: domain Description: Cas1_I-II-III Location: 23264-24218 bp Feature: gene Location: 24367-25323 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 24574-25180 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 24574-25180 bp Feature: gene Location: 25557-25748 bp Feature: gene Location: 25886-26476 bp Feature: domain Description: SpoT Location: 25913-26384 bp Feature: domain Description: SpoT Location: 25913-26384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR, SpoT (COG0317)

Seq: WJFC01000129.1 Scytonema sp. UIC 10036 c00220_NODE_22.., whole genome shotgun sequence (35780 bp)
Overview 1 RT 1: 21143-26547 bp Neighborhood of RT #1 [21143, 26547] RVT_N RVT-GII RVT-GII Intron_maturas2 HNHc RVT-GII GIIM McrA Feature: gene Location: 21143-21370 bp Feature: gene Location: 21536-21703 bp Feature: gene Location: 21721-22308 bp Feature: domain Description: RVT_N Location: 21757-22003 bp Feature: domain Description: RVT_N Location: 21757-22003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22054-22294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22054-22294 bp Feature: gene Location: 22328-22471 bp Feature: gene Location: 22799-24583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23060-23855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23060-23855 bp Feature: domain Description: Intron_maturas2 Location: 23957-24194 bp Feature: domain Description: Intron_maturas2 Location: 23957-24194 bp Feature: domain Description: HNHc Note: nucleases Location: 24374-24539 bp Feature: domain Description: HNHc Note: nucleases Location: 24374-24539 bp Feature: gene Location: 24720-25676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24732-25092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24732-25092 bp Feature: domain Description: GIIM Note: maturase Location: 25149-25338 bp Feature: domain Description: GIIM Note: maturase Location: 25149-25338 bp Feature: domain Description: McrA Location: 25353-25647 bp Feature: domain Description: McrA Location: 25353-25647 bp Feature: gene Location: 26023-26328 bp Feature: gene Location: 26353-26547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), GIIM (pfam08388), McrA (COG4058)

Seq: WJFC01000169.1 Scytonema sp. UIC 10036 c00283_NODE_28.., whole genome shotgun sequence (30058 bp)
Overview 1 RT 1: 3252-12884 bp Neighborhood of RT #1 [3252, 12884] FhaB FhaB HemolysinCabind HemolysinCabind HemolysinCabind HemolysinCabind HemolysinCabind HemolysinCabind RVT-GII RVT-GII McrA RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3252-6242 bp Feature: domain Description: FhaB Location: 3321-5193 bp Feature: domain Description: FhaB Location: 3321-5193 bp Feature: domain Description: FhaB Location: 5280-6213 bp Feature: domain Description: FhaB Location: 5280-6213 bp Feature: gene Location: 6369-7829 bp Feature: domain Description: HemolysinCabind Location: 6822-6915 bp Feature: domain Description: HemolysinCabind Location: 6822-6915 bp Feature: domain Description: HemolysinCabind Location: 6918-7023 bp Feature: domain Description: HemolysinCabind Location: 6918-7023 bp Feature: domain Description: HemolysinCabind Location: 7185-7269 bp Feature: domain Description: HemolysinCabind Location: 7185-7269 bp Feature: domain Description: HemolysinCabind Location: 7305-7374 bp Feature: domain Description: HemolysinCabind Location: 7305-7374 bp Feature: domain Description: HemolysinCabind Location: 7386-7482 bp Feature: domain Description: HemolysinCabind Location: 7386-7482 bp Feature: domain Description: HemolysinCabind Location: 7551-7596 bp Feature: domain Description: HemolysinCabind Location: 7551-7596 bp Feature: gene Location: 8969-9883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8981-9131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8981-9131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9134-9299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9134-9299 bp Feature: domain Description: McrA Location: 9530-9854 bp Feature: domain Description: McrA Location: 9530-9854 bp Feature: gene Location: 10020-11804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10281-11076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10281-11076 bp Feature: domain Description: Intron_maturas2 Location: 11178-11415 bp Feature: domain Description: Intron_maturas2 Location: 11178-114 15 bp Feature: domain Description: HNHc Note: nucleases Location: 11595-11760 bp Feature: domain Description: HNHc Note: nucleases Location: 11595-11760 bp Feature: gene Location: 12035-12250 bp Feature: gene Location: 12672-12884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FhaB (COG3210), HemolysinCabind (pfam00353), RVT-GII, McrA (COG4058), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WJFC01000209.1 Scytonema sp. UIC 10036 c00342_NODE_34.., whole genome shotgun sequence (23452 bp)
Overview 1 RT 1: 8720-11951 bp Neighborhood of RT #1 [8720, 12469] RVT-UG4 RpoE Feature: gene Location: 8720-9127 bp Feature: gene Location: 9096-9317 bp Feature: gene Location: 9519-9983 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 9543-9828 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 9543-9828 bp Feature: gene Location: 10002-11204 bp Feature: gene Location: 11393-12469 bp Feature: domain Description: RpoE Location: 11456-11951 bp Feature: domain Description: RpoE Location: 11456-11951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, RpoE (COG3343)