myRT

myRT report for GCA_009727485.1_ASM972748v1

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Seq: WOAT01000027.1 Pseudomonas aeruginosa strain PA162 NODE_27_length_81923_cov_30.412575, whole genome shotgun sequence (81923 bp)
Overview 1 RT 1: 71758-81534 bp Neighborhood of RT #1 [71758, 81617] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH INT_Rci_Hp1_C Feature: gene Location: 71758-73611 bp Feature: domain Description: PRK05658 Location: 71770-73609 bp Feature: domain Description: PRK05658 Location: 71 770-73609 bp Feature: gene Location: 73718-77455 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73826-74483 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73826-74483 bp Feature: domain Description: PRK09776 Location: 74696-75167 bp Feature: domain Description: PRK09776 Location: 74696-751 67 bp Feature: domain Description: PAS Location: 75212-75749 bp Feature: domain Description: PAS Location: 7521 2-75749 bp Feature: domain Description: PRK10060 Location: 75758-77405 bp Feature: domain Description: PRK1 0060 Location: 75758-77405 bp Feature: gene Location: 78536-80221 bp Feature: RT Description: RVT_N Location: 78593-78833 bp Feature: RT Description: RVT_N Location: 78593-78833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78881-79517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78881 -7951 7 bp Feature: domain Description: GIIM Note: maturase Location: 79571-79802 bp Feature: domain Description: GIIM Note: maturase Location: 79571 -79802 bp Feature: domain Description: HNH Note: nucleases Location: 80054-80192 bp Feature: domain Description: HNH Note: nucleases Location: 80054-801 92 bp Feature: gene Location: 80523-81617 bp Feature: domain Description: INT_Rci_Hp1_C Location: 81033-81534 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 81 033-81 534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), INT_Rci_Hp1_C (cd00796)