myRT

myRT report for GCA_009727755.1_ASM972775v1

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Seq: WOBG01000017.1 Aliivibrio fischeri strain emors.7.1 E._mors_7.1.4336_contig_17, whole genome shotgun sequence (776138 bp)
Overview 1 RT 1: 730934-734562 bp Neighborhood of RT #1 [730934, 734588] HTH_XRE RVT-Retrons INT_C_like_1 AlaE Feature: gene Location: 730934-731155 bp Feature: gene Location: 731212-731487 bp Feature: domain Description: HTH_XRE Location: 731227-731392 bp Feature: domain Description: HTH_XRE Location: 731 227-731 392 bp Feature: gene Location: 731480-732610 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 731618-732167 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 731 61 8-7321 67 bp Feature: gene Location: 732633-733787 bp Feature: domain Description: INT_C_like_1 Location: 733197-733728 bp Feature: domain Description: INT_C_like_1 Location: 7331 97-733728 bp Feature: gene Location: 734136-734588 bp Feature: domain Description: AlaE Location: 734160-734562 bp Feature: domain Description: AlaE Location: 7341 60-734562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, INT_C_like_1 (cd01184), AlaE (pfam06610)

Seq: WOBG01000009.1 Aliivibrio fischeri strain emors.7.1 E._mors_7.1.4336_contig_9, whole genome shotgun sequence (237517 bp)
Overview 1 RT 1: 193488-202893 bp Neighborhood of RT #1 [193488, 202893] RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like DUF4145 HsdR RT_G2_intron RVT-UG1 nitrilase_Rim1_like Feature: gene Location: 193488-194645 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 193668-194028 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 193668-19402 8 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 194058-194628 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 194058-19462 8 bp Feature: gene Location: 194685-198317 bp Feature: domain Description: DUF4145 Location: 194829-195108 bp Feature: domain Description: DUF4145 Location: 19482 9-195108 bp Feature: domain Description: HsdR Location: 195408-198240 bp Feature: domain Description: HsdR Location: 195408-1982 40 bp Feature: gene Location: 198335-202024 bp Feature: domain Description: RT_G2_intron Location: 198620-198740 bp Feature: domain Description: RT_G2 _intron Location: 19862 0-198740 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 198947-199400 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 198947-199400 bp Feature: domain Description: nitrilase_Rim1_like Location: 201392-201695 bp Feature: domain Description: nitrilase_Rim1_like Location: 2 01392 -2 01695 bp Feature: gene Location: 202033-202461 bp Feature: gene Location: 202540-202893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_SonII-TRD2-CR2_like (cd17246), DUF4145 (pfam13643), HsdR (COG4096), RT_G2_intron (cd01651), RVT-UG1, nitrilase_Rim1_like (cd07574)