myRT

myRT report for GCA_009729685.1_ASM972968v1

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Seq: WOEO01000047.1 Escherichia coli strain IBS49 scaffold_46, whole genome shotgun sequence (12585 bp)
Overview 1 RT 1: 8174-11862 bp Neighborhood of RT #1 [8174, 11864] RVT-GII KOG4768 PRK13732 Feature: gene Location: 8174-8464 bp Feature: gene Location: 8976-9185 bp Feature: gene Location: 9320-10417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9587-10400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9587-1 0400 bp Feature: gene Location: 10359-11222 bp Feature: domain Description: KOG4768 Location: 10398-11154 bp Feature: domain Description: KOG4768 Location: 1 0398-1 1 1 54 bp Feature: gene Location: 11262-11864 bp Feature: domain Description: PRK13732 Location: 11367-11862 bp Feature: domain Description: PRK1 3732 Location: 1 1 367-1 1 862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), PRK13732 (single-stranded DNA-binding protein; Provisional)

Seq: WOEO01000010.1 Escherichia coli strain IBS49 scaffold_9, whole genome shotgun sequence (198075 bp)
Overview 1 RT 1: 114052-122157 bp Neighborhood of RT #1 [114052, 122210] TrbL_P TrbL VbhA_like VapI RVT-UG10 HTH_Tnp_1 Feature: gene Location: 114052-115452 bp Feature: domain Description: TrbL_P Location: 114139-115036 bp Feature: domain Description: TrbL_P Location: 114139-115036 bp Feature: domain Description: TrbL Location: 115165-115408 bp Feature: domain Description: TrbL Location: 115165-115408 bp Feature: gene Location: 115534-115968 bp Feature: domain Description: VbhA_like Location: 115549-115711 bp Feature: domain Description: VbhA_like Location: 115549-115711 bp Feature: domain Description: VapI Location: 115723-115963 bp Feature: domain Description: VapI Location: 11572 3-115963 bp Feature: gene Location: 116150-121480 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 117482-118142 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 117482 -118142 bp Feature: gene Location: 121691-121840 bp Feature: gene Location: 121947-122210 bp Feature: domain Description: HTH_Tnp_1 Location: 121953-122157 bp Feature: domain Description: HTH_Tnp_1 Location: 12 1953-12 2 157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL_P (TIGR02783), TrbL (pfam04610), VbhA_like (cl17006), VapI (COG3093), RVT-UG10, HTH_Tnp_1 (pfam01527)