myRT

myRT report for GCA_009730935.1_ASM973093v1

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Seq: BCEP01000019.1 Streptococcus ruminantium DNA, scaffold: scaffold_contig019, strain: MO492, whole genome shotgun sequence (58695 bp)
Overview 1 RT 1: 4830-13744 bp Neighborhood of RT #1 [4830, 13767] PRK13805 RVT-UG2 PRK09225 CydD Feature: gene Location: 4830-7526 bp Feature: domain Description: PRK13805 Location: 4905-7491 bp Feature: domain Description: PRK1 3805 Location: 4905-7491 bp Feature: gene Location: 8050-8280 bp Feature: gene Location: 8361-9686 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 8556-9366 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 8556-9366 bp Feature: gene Location: 10321-11817 bp Feature: domain Description: PRK09225 Location: 10348-11806 bp Feature: domain Description: PRK09225 Location: 1 0348-1 1 806 bp Feature: gene Location: 11998-13767 bp Feature: domain Description: CydD Location: 12097-13744 bp Feature: domain Description: CydD Location: 1 2097-1 3744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13805 (bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional), RVT-UG2, PRK09225 (threonine synthase; Validated), CydD (TIGR02857)

Seq: BCEP01000029.1 Streptococcus ruminantium DNA, scaffold: scaffold_contig029, strain: MO492, whole genome shotgun sequence (112655 bp)
Overview 1 RT 1: 41390-51559 bp Neighborhood of RT #1 [41390, 51559] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 41390-41689 bp Feature: gene Location: 41760-43103 bp Feature: domain Description: KOG1000 Location: 42039-42354 bp Feature: domain Description: KOG1000 Location: 42 039-42 354 bp Feature: gene Location: 43241-45028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43511-44303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43511-44303 bp Feature: domain Description: Intron_maturas2 Location: 44408-44639 bp Feature: domain Description: Intron_maturas2 Location: 44408-44639 bp Feature: domain Description: HNHc Note: nucleases Location: 44804-44990 bp Feature: domain Description: HNHc Note: nucleases Location: 44804-44990 bp Feature: gene Location: 45517-50958 bp Feature: domain Description: N6_Mtase Location: 47509-48100 bp Feature: domain Description: N6_Mtase Location: 47509-48100 bp Feature: domain Description: COG4646 Location: 48691-50815 bp Feature: domain Description: COG4646 Location: 48691-50815 bp Feature: gene Location: 51008-51559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )