myRT

myRT report for GCA_009731015.1_ASM973101v1

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Seq: BCET01000027.1 Streptococcus ruminantium DNA, scaffold: scaffold_contig027, strain: MO430, whole genome shotgun sequence (162392 bp)
Overview 1 RT 1: 44930-53832 bp Neighborhood of RT #1 [44930, 53867] CydD PRK09225 RVT-UG2 PRK13805 Feature: gene Location: 44930-46699 bp Feature: domain Description: CydD Location: 45029-46676 bp Feature: domain Description: CydD Location: 45029-46676 bp Feature: gene Location: 46880-48376 bp Feature: domain Description: PRK09225 Location: 46907-48365 bp Feature: domain Description: PRK09225 Location: 46907-48365 bp Feature: gene Location: 49011-50336 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 49206-50016 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 49206-5001 6 bp Feature: gene Location: 50417-50647 bp Feature: gene Location: 51171-53867 bp Feature: domain Description: PRK13805 Location: 51246-53832 bp Feature: domain Description: PRK1 3805 Location: 51 246-53832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CydD (TIGR02857), PRK09225 (threonine synthase; Validated), RVT-UG2, PRK13805 (bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional)

Seq: BCET01000036.1 Streptococcus ruminantium DNA, scaffold: scaffold_contig036, strain: MO430, whole genome shotgun sequence (185833 bp)
Overview 1 RT 1: 95383-105552 bp Neighborhood of RT #1 [95383, 105552] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 95383-95682 bp Feature: gene Location: 95753-97096 bp Feature: domain Description: KOG1000 Location: 96032-96347 bp Feature: domain Description: KOG1000 Location: 96032 -96347 bp Feature: gene Location: 97234-99021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97504-98296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97504-982 96 bp Feature: domain Description: Intron_maturas2 Location: 98401-98632 bp Feature: domain Description: Intron_maturas2 Location: 98401-98632 bp Feature: domain Description: HNHc Note: nucleases Location: 98797-98983 bp Feature: domain Description: HNHc Note: nucleases Location: 98797-98983 bp Feature: gene Location: 99510-104951 bp Feature: domain Description: N6_Mtase Location: 101502-102093 bp Feature: domain Description: N6_Mtase Location: 101502 -102 093 bp Feature: domain Description: COG4646 Location: 102684-104808 bp Feature: domain Description: COG4646 Location: 102 684-104808 bp Feature: gene Location: 105001-105552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )