myRT

myRT report for GCA_009731035.1_ASM973103v1

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Seq: BCEU01000002.1 Streptococcus ruminantium DNA, scaffold: scaffold_contig002, strain: MO449, whole genome shotgun sequence (67783 bp)
Overview 1 RT 1: 44951-53853 bp Neighborhood of RT #1 [44951, 53888] CydD PRK09225 RVT-UG2 PRK13805 Feature: gene Location: 44951-46720 bp Feature: domain Description: CydD Location: 45050-46697 bp Feature: domain Description: CydD Location: 45050-46697 bp Feature: gene Location: 46901-48397 bp Feature: domain Description: PRK09225 Location: 46928-48386 bp Feature: domain Description: PRK09225 Location: 46928-48386 bp Feature: gene Location: 49032-50357 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 49227-50037 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 49227-50037 bp Feature: gene Location: 50438-50668 bp Feature: gene Location: 51192-53888 bp Feature: domain Description: PRK13805 Location: 51267-53853 bp Feature: domain Description: PRK1 3805 Location: 51 267-53853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CydD (TIGR02857), PRK09225 (threonine synthase; Validated), RVT-UG2, PRK13805 (bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional)

Seq: BCEU01000005.1 Streptococcus ruminantium DNA, scaffold: scaffold_contig005, strain: MO449, whole genome shotgun sequence (252506 bp)
Overview 1 RT 1: 43288-53457 bp Neighborhood of RT #1 [43288, 53457] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 43288-43587 bp Feature: gene Location: 43658-45001 bp Feature: domain Description: KOG1000 Location: 43937-44252 bp Feature: domain Description: KOG1000 Location: 43937-442 52 bp Feature: gene Location: 45139-46926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45409-46201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45409-462 01 bp Feature: domain Description: Intron_maturas2 Location: 46306-46537 bp Feature: domain Description: Intron_maturas2 Location: 46306-46537 bp Feature: domain Description: HNHc Note: nucleases Location: 46702-46888 bp Feature: domain Description: HNHc Note: nucleases Location: 46702 -46888 bp Feature: gene Location: 47415-52856 bp Feature: domain Description: N6_Mtase Location: 49407-49998 bp Feature: domain Description: N6_Mtase Location: 49407-49998 bp Feature: domain Description: COG4646 Location: 50589-52713 bp Feature: domain Description: COG4646 Location: 50589-52 713 bp Feature: gene Location: 52906-53457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )