myRT

myRT report for GCA_009731175.1_ASM973117v1

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Seq: BCFB01000042.1 Streptococcus ruminantium DNA, scaffold: scaffold_contig042, strain: DTK366, whole genome shotgun sequence (107381 bp)
Overview 1 RT 1: 47959-58128 bp Neighborhood of RT #1 [47959, 58128] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 47959-48510 bp Feature: gene Location: 48560-54001 bp Feature: domain Description: N6_Mtase Location: 50552-51143 bp Feature: domain Description: N6_Mtase Location: 50552-51 1 43 bp Feature: domain Description: COG4646 Location: 51734-53858 bp Feature: domain Description: COG4646 Location: 51 734-53858 bp Feature: gene Location: 54499-56277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54760-55552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54760-55552 bp Feature: domain Description: Intron_maturas2 Location: 55657-55888 bp Feature: domain Description: Intron_maturas2 Location: 55657-55888 bp Feature: domain Description: HNHc Note: nucleases Location: 56053-56239 bp Feature: domain Description: HNHc Note: nucleases Location: 56053-56239 bp Feature: gene Location: 56415-57758 bp Feature: domain Description: KOG1000 Location: 56694-57009 bp Feature: domain Description: KOG1 000 Location: 56694-57009 bp Feature: gene Location: 57829-58128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )