myRT

myRT report for GCA_009734515.1_ASM973451v1

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Seq: WMGW01000126.1 Enterococcus faecium strain R407 R407_126, whole genome shotgun sequence (3539 bp)
Overview 1 RT 1: 1-2787 bp Neighborhood of RT #1 [1, 3449] Rve HsdM RVT-AbiP2 Feature: gene Location: 1-135 bp Feature: domain Description: Rve Location: 7-106 bp Feature: domain Description: Rve Location: 7-1 06 bp Feature: gene Location: 158-1636 bp Feature: domain Description: HsdM Location: 179-1604 bp Feature: domain Description: HsdM Location: 1 79-1 604 bp Feature: gene Location: 1974-3449 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2322-2787 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2322-2787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), HsdM (COG0286), RVT-AbiP2

Seq: WMGW01000133.1 Enterococcus faecium strain R407 R407_133, whole genome shotgun sequence (2747 bp)
Overview 1 RT 1: 319-2503 bp Neighborhood of RT #1 [319, 2616] RVT-GII HNHc Feature: gene Location: 319-552 bp Feature: gene Location: 739-2616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2350-2503 bp Feature: domain Description: HNHc Note: nucleases Location: 2 350-2 503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WMGW01000008.1 Enterococcus faecium strain R407 R407_8, whole genome shotgun sequence (66981 bp)
Overview 1 RT 1: 43684-49051 bp Neighborhood of RT #1 [43684, 49051] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 43684-44187 bp Feature: domain Description: ArdA Location: 43702-44173 bp Feature: domain Description: ArdA Location: 43 702-44173 bp Feature: gene Location: 44189-44398 bp Feature: gene Location: 44528-46438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44861-45599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44861-45599 bp Feature: domain Description: HNHc Note: nucleases Location: 46154-46319 bp Feature: domain Description: HNHc Note: nucleases Location: 46154-463 19 bp Feature: gene Location: 47318-48502 bp Feature: domain Description: HTH_XRE Location: 47348-47492 bp Feature: domain Description: HTH_XRE Location: 473 48-47492 bp Feature: domain Description: Rol_Rep_N Location: 47525-47789 bp Feature: domain Description: Rol_Rep_N Location: 47525-47789 bp Feature: domain Description: Rep_trans Location: 47813-48425 bp Feature: domain Description: Rep_trans Location: 47813 -48425 bp Feature: gene Location: 48761-49051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)