myRT

myRT report for GCA_009734925.1_ASM973492v1

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Seq: WMGR01000123.1 Enterococcus faecium strain F11J F11J_123, whole genome shotgun sequence (3649 bp)
Overview 1 RT 1: 3-2897 bp Neighborhood of RT #1 [3, 3559] Rve HsdM RVT-AbiP2 Feature: gene Location: 3-245 bp Feature: domain Description: Rve Location: 24-216 bp Feature: domain Description: Rve Location: 24-21 6 bp Feature: gene Location: 268-1746 bp Feature: domain Description: HsdM Location: 289-1714 bp Feature: domain Description: HsdM Location: 289-1 71 4 bp Feature: gene Location: 2084-3559 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2432-2897 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2432-2897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), HsdM (COG0286), RVT-AbiP2

Seq: WMGR01000132.1 Enterococcus faecium strain F11J F11J_132, whole genome shotgun sequence (2747 bp)
Overview 1 RT 1: 132-2429 bp Neighborhood of RT #1 [132, 2429] RVT-GII HNHc Feature: gene Location: 132-2009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1185 bp Feature: domain Description: HNHc Note: nucleases Location: 1743-1896 bp Feature: domain Description: HNHc Note: nucleases Location: 1743-1896 bp Feature: gene Location: 2196-2429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WMGR01000009.1 Enterococcus faecium strain F11J F11J_9, whole genome shotgun sequence (64046 bp)
Overview 1 RT 1: 43684-49051 bp Neighborhood of RT #1 [43684, 49051] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 43684-44187 bp Feature: domain Description: ArdA Location: 43702-44173 bp Feature: domain Description: ArdA Location: 43 702-44173 bp Feature: gene Location: 44189-44398 bp Feature: gene Location: 44528-46438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44861-45599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44861-45599 bp Feature: domain Description: HNHc Note: nucleases Location: 46154-46319 bp Feature: domain Description: HNHc Note: nucleases Location: 46154-463 19 bp Feature: gene Location: 47318-48502 bp Feature: domain Description: HTH_XRE Location: 47348-47492 bp Feature: domain Description: HTH_XRE Location: 473 48-47492 bp Feature: domain Description: Rol_Rep_N Location: 47525-47789 bp Feature: domain Description: Rol_Rep_N Location: 47525-47789 bp Feature: domain Description: Rep_trans Location: 47813-48425 bp Feature: domain Description: Rep_trans Location: 47813 -48425 bp Feature: gene Location: 48761-49051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)