myRT

myRT report for GCA_009734975.1_ASM973497v1

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Seq: WMGO01000027.1 Enterococcus faecium strain H123S2 contig00027, whole genome shotgun sequence (29962 bp)
Overview 1 RT 1: 14159-19213 bp Neighborhood of RT #1 [14159, 19213] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 14159-14662 bp Feature: domain Description: ArdA Location: 14177-14648 bp Feature: domain Description: ArdA Location: 1 41 77-1 4648 bp Feature: gene Location: 14664-14873 bp Feature: gene Location: 15003-16913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15336-16074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5336-1 6074 bp Feature: domain Description: HNHc Note: nucleases Location: 16629-16794 bp Feature: domain Description: HNHc Note: nucleases Location: 1 6629-1 6794 bp Feature: gene Location: 17793-18977 bp Feature: domain Description: HTH_XRE Location: 17823-17967 bp Feature: domain Description: HTH_XRE Location: 1 7823-1 7967 bp Feature: domain Description: Rol_Rep_N Location: 18000-18264 bp Feature: domain Description: Rol_Rep_N Location: 1 8000-1 8264 bp Feature: domain Description: Rep_trans Location: 18288-18900 bp Feature: domain Description: Rep_trans Location: 1 8288-1 8900 bp Feature: gene Location: 19070-19213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: WMGO01000134.1 Enterococcus faecium strain H123S2 contig00134, whole genome shotgun sequence (3475 bp)
Overview 1 RT 1: 91-3350 bp Neighborhood of RT #1 [91, 3382] RVT-AbiP2 HsdM Feature: gene Location: 91-1566 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 439-904 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 439-904 bp Feature: gene Location: 1904-3382 bp Feature: domain Description: HsdM Location: 1925-3350 bp Feature: domain Description: HsdM Location: 192 5-3350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: WMGO01000142.1 Enterococcus faecium strain H123S2 contig00142, whole genome shotgun sequence (2747 bp)
Overview 1 RT 1: 319-2503 bp Neighborhood of RT #1 [319, 2616] RVT-GII HNHc Feature: gene Location: 319-552 bp Feature: gene Location: 739-2616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2350-2503 bp Feature: domain Description: HNHc Note: nucleases Location: 23 50-2503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)