myRT

myRT report for GCA_009735025.1_ASM973502v1

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Seq: WMGJ01000027.1 Enterococcus faecium strain C12D contig00027, whole genome shotgun sequence (30157 bp)
Overview 1 RT 1: 8360-13400 bp Neighborhood of RT #1 [8360, 13414] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 8360-8503 bp Feature: gene Location: 8596-9780 bp Feature: domain Description: HTH_XRE Location: 8626-8770 bp Feature: domain Description: HTH_XRE Location: 8626-8770 bp Feature: domain Description: Rol_Rep_N Location: 8803-9067 bp Feature: domain Description: Rol_Rep_N Location: 8803-9067 bp Feature: domain Description: Rep_trans Location: 9091-9703 bp Feature: domain Description: Rep_trans Location: 9091 -9703 bp Feature: gene Location: 10660-12570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10993-11731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0993-1 1 731 bp Feature: domain Description: HNHc Note: nucleases Location: 12286-12451 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2286-1 2451 bp Feature: gene Location: 12758-12898 bp Feature: gene Location: 12911-13414 bp Feature: domain Description: ArdA Location: 12929-13400 bp Feature: domain Description: ArdA Location: 1 2929-1 3400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: WMGJ01000131.1 Enterococcus faecium strain C12D contig00131, whole genome shotgun sequence (3474 bp)
Overview 1 RT 1: 90-3349 bp Neighborhood of RT #1 [90, 3381] RVT-AbiP2 HsdM Feature: gene Location: 90-1565 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 438-903 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 438-903 bp Feature: gene Location: 1903-3381 bp Feature: domain Description: HsdM Location: 1924-3349 bp Feature: domain Description: HsdM Location: 192 4-3349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: WMGJ01000143.1 Enterococcus faecium strain C12D contig00143, whole genome shotgun sequence (2747 bp)
Overview 1 RT 1: 132-2429 bp Neighborhood of RT #1 [132, 2429] RVT-GII HNHc Feature: gene Location: 132-2009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1185 bp Feature: domain Description: HNHc Note: nucleases Location: 1743-1896 bp Feature: domain Description: HNHc Note: nucleases Location: 1743 -1896 bp Feature: gene Location: 2196-2429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)