myRT

myRT report for GCA_009737235.1_ASM973723v1

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Seq: WOTJ01000017.1 Mesorhizobium japonicum strain R7ANSxAA23 contig_17, whole genome shotgun sequence (139138 bp)
Overview 1 RT 1: 112149-115812 bp Neighborhood of RT #1 [112149, 115812] DUF5372 RVT-GII NAAAR Feature: gene Location: 112149-112442 bp Feature: gene Location: 112672-112959 bp Feature: domain Description: DUF5372 Location: 112690-112909 bp Feature: domain Description: DUF5372 Location: 1 1 2690-1 1 2909 bp Feature: gene Location: 113074-113826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113089-113611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 3089-1 1 361 1 bp Feature: gene Location: 113429-115396 bp Feature: domain Description: NAAAR Location: 114314-115361 bp Feature: domain Description: NAAAR Location: 1 1 431 4-1 1 5361 bp Feature: gene Location: 115492-115812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), RVT-GII, NAAAR (cd03317)

Seq: WOTJ01000008.1 Mesorhizobium japonicum strain R7ANSxAA23 contig_8, whole genome shotgun sequence (273070 bp)
Overview 1 RT 1: 94712-100725 bp Neighborhood of RT #1 [94712, 100832] S14_ClpP_1 PinE RVT-UG12 INT_C_like_1 Feature: gene Location: 94712-95653 bp Feature: domain Description: S14_ClpP_1 Location: 94898-95039 bp Feature: domain Description: S14_ClpP_1 Location: 94898-95039 bp Feature: gene Location: 95682-96254 bp Feature: domain Description: PinE Location: 95703-96243 bp Feature: domain Description: PinE Location: 95703-962 43 bp Feature: gene Location: 96995-98206 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 97001-97181 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 97001-97181 bp Feature: gene Location: 97769-97942 bp Feature: gene Location: 98967-100832 bp Feature: domain Description: INT_C_like_1 Location: 100284-100725 bp Feature: domain Description: INT_C_like_1 Location: 1002 84-10072 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT S14_ClpP_1 (cd07016), PinE (COG1961), RVT-UG12, INT_C_like_1 (cd01184)