myRT

myRT report for GCA_009739265.1_ASM973926v1

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Seq: SZWA01000013.1 Salmonella enterica strain DR-040 NODE_13_length_81626_cov_14.9903, whole genome shotgun sequence (81626 bp)
Overview 1 RT 1: 31944-36869 bp Neighborhood of RT #1 [31944, 36877] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31944-32666 bp Feature: domain Description: INT_P4_C Location: 32064-32595 bp Feature: domain Description: INT_P4_C Location: 32064-32595 bp Feature: gene Location: 32991-33953 bp Feature: gene Location: 33953-34888 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34064-34649 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34064-34649 bp Feature: gene Location: 35136-35345 bp Feature: gene Location: 35690-36877 bp Feature: domain Description: PRK10473 Location: 35693-36869 bp Feature: domain Description: PRK1 0473 Location: 35693-36869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)

Seq: SZWA01000002.1 Salmonella enterica strain DR-040 NODE_2_length_783095_cov_13.201, whole genome shotgun sequence (783095 bp)
Overview 1 RT 1: 216359-222664 bp Neighborhood of RT #1 [216359, 222666] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 216359-218059 bp Feature: domain Description: 5 Location: 217583-217877 bp Feature: domain Description: 5 Location: 2 17583-2 17877 bp Feature: gene Location: 218189-218356 bp Feature: gene Location: 218966-219730 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 219089-219542 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 19089-2 19542 bp Feature: gene Location: 220054-220560 bp Feature: domain Description: PRK10201 Location: 220057-220555 bp Feature: domain Description: PRK102 01 Location: 2 2 0057-2 2 0555 bp Feature: gene Location: 220684-222666 bp Feature: domain Description: PRK05658 Location: 220822-222664 bp Feature: domain Description: PRK05658 Location: 2 2 082 2 -2 2 2 664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)