myRT

myRT report for GCA_009739405.1_ASM973940v1

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Seq: SCPF01000001.1 Bacteroides uniformis isolate P1-2 tig00000063, whole genome shotgun sequence (5026450 bp)
Overview 1 RT 1: 2356476-2361601 bp 2 RT 2: 2480533-2484296 bp 3 RT 3: 4882523-4885276 bp Neighborhood of RT #1 [2356476, 2361601] Toprim_2 RVT-GII Intron_maturas2 Neighborhood of RT #2 [2480533, 2484367] RVT-DGRs Phage_holin_4_1 Neighborhood of RT #3 [4882523, 4885305] KOG4768 RVT-GII RVT-GII Bac_Flav_CT_G Feature: gene Location: 2356476-2357879 bp Feature: gene Location: 2358162-2359091 bp Feature: domain Description: Toprim_2 Location: 2358714-2359002 bp Feature: domain Description: Toprim_2 Location: 235871 4-2359002 bp Feature: gene Location: 2359063-2360871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2359327-2360149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2359327-23601 49 bp Feature: domain Description: Intron_maturas2 Location: 2360218-2360527 bp Feature: domain Description: Intron_maturas2 Location: 236021 8-2360527 bp Feature: gene Location: 2361160-2361303 bp Feature: gene Location: 2361419-2361601 bp Feature: gene Location: 2480533-2481867 bp Feature: gene Location: 2481911-2482255 bp Feature: gene Location: 2482512-2483546 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2482722-2483334 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2482722-2483334 bp Feature: gene Location: 2483524-2483895 bp Feature: gene Location: 2483897-2484367 bp Feature: domain Description: Phage_holin_4_1 Location: 2483984-2484296 bp Feature: domain Description: Phage_holin_4_1 Location: 2483984-2484296 bp Feature: gene Location: 4882523-4882702 bp Feature: gene Location: 4882731-4883066 bp Feature: domain Description: KOG4768 Location: 4882854-4883058 bp Feature: domain Description: KOG4768 Location: 4882854-4883058 bp Feature: gene Location: 4883150-4883413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4883153-4883390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48831 53-4883390 bp Feature: gene Location: 4883509-4884318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4883512-4883944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488351 2-4883944 bp Feature: gene Location: 4884329-4884484 bp Feature: gene Location: 4884646-4885305 bp Feature: domain Description: Bac_Flav_CT_G Location: 4884775-4885276 bp Feature: domain Description: Bac_Flav_CT_G Location: 4884775-4885276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Toprim_2 (pfam13155), RVT-GII, Intron_maturas2 (pfam01348), RVT-DGRs, Phage_holin_4_1 (pfam05105), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Bac_Flav_CT_G (TIGR03783)