myRT

myRT report for GCA_009742465.1_ASM974246v1

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Seq: WPEN01000182.1 Shigella flexneri strain 2013ZH062 NODE_182_length_5366_cov_515.958_ID_67497, whole genome shotgun sequence (5366 bp)
Overview 1 RT 1: 210-3288 bp Neighborhood of RT #1 [210, 3288] PAP2_acid_phosphatase Tra5 RVT-GII GIIM Feature: gene Location: 210-959 bp Feature: domain Description: PAP2_acid_phosphatase Location: 285-939 bp Feature: domain Description: PAP2_acid_phosphatase Location: 285-939 bp Feature: gene Location: 1355-1555 bp Feature: domain Description: Tra5 Location: 1364-1538 bp Feature: domain Description: Tra5 Location: 1 364-1 538 bp Feature: gene Location: 1568-2371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1868-2363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 868-2363 bp Feature: gene Location: 2424-2750 bp Feature: domain Description: GIIM Note: maturase Location: 2457-2676 bp Feature: domain Description: GIIM Note: maturase Location: 2457-2676 bp Feature: gene Location: 3103-3288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, PAP2_acid_phosphatase (cd03397), GIIM (pfam08388)

Seq: WPEN01000251.1 Shigella flexneri strain 2013ZH062 NODE_251_length_2272_cov_1814.94_ID_67635, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WPEN01000263.1 Shigella flexneri strain 2013ZH062 NODE_263_length_2089_cov_319.392_ID_67659, whole genome shotgun sequence (2089 bp)
Overview 1 RT 1: 107-2086 bp Neighborhood of RT #1 [107, 2086] DDE_Tnp_IS66 RVT-GII GIIM Feature: gene Location: 107-238 bp Feature: domain Description: DDE_Tnp_IS66 Location: 119-212 bp Feature: domain Description: DDE_Tnp_IS66 Location: 119-212 bp Feature: gene Location: 799-1932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901-1555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901-1555 bp Feature: domain Description: GIIM Note: maturase Location: 1633-1855 bp Feature: domain Description: GIIM Note: maturase Location: 163 3 -1855 bp Feature: gene Location: 1958-2086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)