myRT

myRT report for GCA_009743405.1_ASM974340v1

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Seq: WPFW01000178.1 Shigella flexneri strain 2012ZH037 NODE_178_length_5707_cov_635.431_ID_64319, whole genome shotgun sequence (5707 bp)
Overview 1 RT 1: 210-3345 bp Neighborhood of RT #1 [210, 3345] PAP2_acid_phosphatase Tra5 RVT-GII GIIM Feature: gene Location: 210-959 bp Feature: domain Description: PAP2_acid_phosphatase Location: 285-939 bp Feature: domain Description: PAP2_acid_phosphatase Location: 285-939 bp Feature: gene Location: 1355-1555 bp Feature: domain Description: Tra5 Location: 1364-1538 bp Feature: domain Description: Tra5 Location: 1 364-1 538 bp Feature: gene Location: 1568-2371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1868-2363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 868-2363 bp Feature: gene Location: 2424-2750 bp Feature: domain Description: GIIM Note: maturase Location: 2457-2676 bp Feature: domain Description: GIIM Note: maturase Location: 2457-2676 bp Feature: gene Location: 3103-3345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, PAP2_acid_phosphatase (cd03397), GIIM (pfam08388)

Seq: WPFW01000246.1 Shigella flexneri strain 2012ZH037 NODE_246_length_2283_cov_894.025_ID_64455, whole genome shotgun sequence (2283 bp)
Overview 1 RT 1: 103-2282 bp Neighborhood of RT #1 [103, 2282] RVT-GII GIIM Feature: gene Location: 103-1626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-1108 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1381 bp Feature: gene Location: 1920-2282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WPFW01000266.1 Shigella flexneri strain 2012ZH037 NODE_266_length_1978_cov_263.236_ID_64495, whole genome shotgun sequence (1978 bp)
Overview 1 RT 1: 47-1926 bp Neighborhood of RT #1 [47, 1926] RVT-GII GIIM Feature: gene Location: 47-1180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149-803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149-803 bp Feature: domain Description: GIIM Note: maturase Location: 881-1103 bp Feature: domain Description: GIIM Note: maturase Location: 881-1103 bp Feature: gene Location: 1275-1658 bp Feature: gene Location: 1732-1926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)