myRT

myRT report for GCA_009744295.1_ASM974429v1

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Seq: WPHZ01000047.1 Agrobacterium vitis strain CG81 CG81_47, whole genome shotgun sequence (11236 bp)
Overview 1 RT 1: 1781-4874 bp Neighborhood of RT #1 [1781, 4906] Phage_int_SAM_4 INT_RitA_C_like RVT-GII PHA02517 Feature: gene Location: 1781-2758 bp Feature: domain Description: Phage_int_SAM_4 Location: 1871-2099 bp Feature: domain Description: Phage_int_SAM_4 Location: 1 871 -2099 bp Feature: domain Description: INT_RitA_C_like Location: 2189-2726 bp Feature: domain Description: INT_RitA_C_like Location: 21 89-2726 bp Feature: gene Location: 2808-2999 bp Feature: gene Location: 3071-3844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3344-3746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3344-3746 bp Feature: gene Location: 3873-4322 bp Feature: gene Location: 4454-4906 bp Feature: domain Description: PHA02517 Location: 4520-4874 bp Feature: domain Description: PHA0251 7 Location: 4520-4874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_4 (pfam13495), INT_RitA_C_like (cd01188), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: WPHZ01000050.1 Agrobacterium vitis strain CG81 CG81_50, whole genome shotgun sequence (9102 bp)
Overview 1 RT 1: 7220-8911 bp Neighborhood of RT #1 [7220, 8991] PHA02517 RVT-GII GIIM INT_RitC_C_like Feature: gene Location: 7220-7588 bp Feature: domain Description: PHA02517 Location: 7229-7496 bp Feature: domain Description: PHA02 517 Location: 72 2 9-7496 bp Feature: gene Location: 7704-7976 bp Feature: gene Location: 7937-8566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7943-8279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7943-82 79 bp Feature: domain Description: GIIM Note: maturase Location: 8351-8534 bp Feature: domain Description: GIIM Note: maturase Location: 8351-8534 bp Feature: gene Location: 8662-8991 bp Feature: domain Description: INT_RitC_C_like Location: 8680-8911 bp Feature: domain Description: INT_RitC_C_like Location: 8680-8911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), INT_RitC_C_like (cd01182)

Seq: WPHZ01000009.1 Agrobacterium vitis strain CG81 CG81_9, whole genome shotgun sequence (259111 bp)
Overview 1 RT 1: 63592-71429 bp Neighborhood of RT #1 [63592, 71429] INT_C_like_1 RVT-UG8 RVT-UG3 Mob_Pre Feature: gene Location: 63592-63765 bp Feature: gene Location: 63868-65427 bp Feature: domain Description: INT_C_like_1 Location: 64795-65344 bp Feature: domain Description: INT_C_like_1 Location: 64795-653 44 bp Feature: gene Location: 65881-67953 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 66499-66955 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 66499-66955 bp Feature: gene Location: 67946-69247 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 68366-68831 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 683 66-6883 1 bp Feature: gene Location: 69607-70764 bp Feature: domain Description: Mob_Pre Location: 69826-70063 bp Feature: domain Description: Mob_Pre Location: 69826-70063 bp Feature: gene Location: 70761-71429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_1 (cd01184), RVT-UG8, RVT-UG3, Mob_Pre (pfam01076)