myRT

myRT report for GCA_009746405.1_ASM974640v1

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Seq: WRXI01000011.1 Klebsiella pneumoniae strain ST15-VIM1 2-ST15-VIM-1_trimmed_(paired)_contig_11, whole genome shotgun sequence (52750 bp)
Overview 1 RT 1: 4527-7889 bp Neighborhood of RT #1 [4527, 7889] PRK10276 RVT-GII Feature: gene Location: 4527-4844 bp Feature: domain Description: PRK10276 Location: 4533-4647 bp Feature: domain Description: PRK1 0276 Location: 4533-4647 bp Feature: gene Location: 4844-5083 bp Feature: gene Location: 5161-6648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5566-6256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5566-6256 bp Feature: gene Location: 6778-7068 bp Feature: gene Location: 7137-7889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: WRXI01000110.1 Klebsiella pneumoniae strain ST15-VIM1 2-ST15-VIM-1_trimmed_(paired)_contig_110, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WRXI01000214.1 Klebsiella pneumoniae strain ST15-VIM1 2-ST15-VIM-1_trimmed_(paired)_contig_214, whole genome shotgun sequence (18897 bp)
Overview 1 RT 1: 3-6553 bp Neighborhood of RT #1 [3, 6555] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 3-413 bp Feature: domain Description: FimC Location: 12-396 bp Feature: domain Description: FimC Location: 12-3 96 bp Feature: gene Location: 445-3054 bp Feature: domain Description: FimD Location: 502-3043 bp Feature: domain Description: FimD Location: 502-3 043 bp Feature: gene Location: 3054-5132 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3462-3906 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 462-3 906 bp Feature: gene Location: 5189-5629 bp Feature: domain Description: Integrase_1 Location: 5195-5411 bp Feature: domain Description: Integrase_1 Location: 5195-5411 bp Feature: gene Location: 5890-6555 bp Feature: domain Description: INT_P4_C Location: 5995-6553 bp Feature: domain Description: INT_P4_C Location: 5995-6553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: WRXI01000053.1 Klebsiella pneumoniae strain ST15-VIM1 2-ST15-VIM-1_trimmed_(paired)_contig_53, whole genome shotgun sequence (12550 bp)
Overview 1 RT 1: 300-4031 bp Neighborhood of RT #1 [300, 4031] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 300-632 bp Feature: domain Description: InsE Location: 324-597 bp Feature: domain Description: InsE Location: 324 -597 bp Feature: gene Location: 629-1063 bp Feature: domain Description: PHA02517 Location: 731-998 bp Feature: domain Description: PHA02517 Location: 731-998 bp Feature: gene Location: 1655-3178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1928-2660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1928-2660 bp Feature: domain Description: GIIM Note: maturase Location: 2735-2933 bp Feature: domain Description: GIIM Note: maturase Location: 2735-2933 bp Feature: gene Location: 3274-3729 bp Feature: domain Description: PHA02517 Location: 3283-3703 bp Feature: domain Description: PHA02517 Location: 3283-3703 bp Feature: gene Location: 3792-4031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)