myRT

myRT report for GCA_009746545.1_ASM974654v1

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Seq: WOWT01000002.1 Oceanobacillus sp. AG Scaffold1_2, whole genome shotgun sequence (296502 bp)
Overview 1 RT 1: 238639-243626 bp Neighborhood of RT #1 [238639, 243626] RVT-UG2 Feature: gene Location: 238639-239751 bp Feature: gene Location: 239741-240700 bp Feature: gene Location: 241074-242417 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 241278-242103 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 241 278-2421 03 bp Feature: gene Location: 242432-242755 bp Feature: gene Location: 243426-243626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2

Seq: WOWT01000025.1 Oceanobacillus sp. AG Scaffold23_1, whole genome shotgun sequence (63534 bp)
Overview 1 RT 1: 8496-11653 bp 2 RT 2: 13874-17281 bp Neighborhood of RT #1 [8496, 11653] group_II_RT_mat RVT-GII UPF0715 Neighborhood of RT #2 [13874, 17281] DUF4306 RVT-GII Feature: gene Location: 8496-8666 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8502-8661 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8502 -8661 bp Feature: gene Location: 8794-8943 bp Feature: gene Location: 8934-9461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9027-9426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902 7-942 6 bp Feature: gene Location: 9800-10171 bp Feature: domain Description: UPF0715 Location: 9827-10160 bp Feature: domain Description: UPF0715 Location: 982 7-10160 bp Feature: gene Location: 10316-11653 bp Feature: gene Location: 13874-14395 bp Feature: domain Description: DUF4306 Location: 13922-14174 bp Feature: domain Description: DUF4306 Location: 1392 2 -14174 bp Feature: gene Location: 14521-14844 bp Feature: gene Location: 15486-16142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15927-16134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1592 7-16134 bp Feature: gene Location: 16254-16403 bp Feature: gene Location: 16919-17281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, UPF0715 (pfam17094), DUF4306 (pfam14154)

Seq: WOWT01000028.1 Oceanobacillus sp. AG Scaffold26_1, whole genome shotgun sequence (53813 bp)
Overview 1 RT 1: 24829-27785 bp Neighborhood of RT #1 [24829, 27862] Aes RVT-GII RimL UPF0066 Feature: gene Location: 24829-24972 bp Feature: gene Location: 25008-25865 bp Feature: domain Description: Aes Location: 25077-25854 bp Feature: domain Description: Aes Location: 25077-25854 bp Feature: gene Location: 26093-26350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26099-26285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26099-26285 bp Feature: gene Location: 26829-27365 bp Feature: domain Description: RimL Location: 26847-27360 bp Feature: domain Description: RimL Location: 26847-273 60 bp Feature: gene Location: 27383-27862 bp Feature: domain Description: UPF0066 Location: 27419-27785 bp Feature: domain Description: UPF0066 Location: 27419-27785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Aes (COG0657), RVT-GII, RimL (COG1670), UPF0066 (pfam01980)

Seq: WOWT01000041.1 Oceanobacillus sp. AG Scaffold39_1, whole genome shotgun sequence (24719 bp)
Overview 1 RT 1: 137-4661 bp Neighborhood of RT #1 [137, 4675] PRK04161 RVT-GII GntT Feature: gene Location: 137-1108 bp Feature: domain Description: PRK04161 Location: 146-1103 bp Feature: domain Description: PRK04 161 Location: 14 6-1103 bp Feature: gene Location: 1742-2608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1967-2585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1967-2585 bp Feature: gene Location: 2758-3033 bp Feature: gene Location: 3347-4675 bp Feature: domain Description: GntT Location: 3356-4661 bp Feature: domain Description: GntT Location: 3356-4 661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04161 (tagatose 1,6-diphosphate aldolase; Reviewed), RVT-GII, GntT (COG2610)

Seq: WOWT01000068.1 Oceanobacillus sp. AG Scaffold65_1, whole genome shotgun sequence (2011 bp)
Overview 1 RT 1: 1-1423 bp Neighborhood of RT #1 [1, 1476] RVT-GII GIIM Feature: gene Location: 1-138 bp Feature: gene Location: 178-1476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1114 bp Feature: domain Description: GIIM Note: maturase Location: 1195-1423 bp Feature: domain Description: GIIM Note: maturase Location: 1195 -1423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)