myRT

myRT report for GCA_009746605.1_ASM974660v1

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Seq: WOWR01000032.1 Pseudomonas putida strain BOE100 Contig_34.34_PputBOE100_Contig_34.34, whole genome shotgun sequence (77267 bp)
Overview 1 RT 1: 11123-17358 bp Neighborhood of RT #1 [11123, 17369] PRK10634 Smf RVT_N RVT-GII YkfC HNH def fmt Feature: gene Location: 11123-11680 bp Feature: domain Description: PRK10634 Location: 11144-11678 bp Feature: domain Description: PRK1 0634 Location: 1 1 1 44-1 1 678 bp Feature: gene Location: 11723-12820 bp Feature: domain Description: Smf Location: 11762-12812 bp Feature: domain Description: Smf Location: 1 1 762-1 281 2 bp Feature: gene Location: 14056-15762 bp Feature: RT Description: RVT_N Location: 14113-14356 bp Feature: RT Description: RVT_N Location: 1 41 1 3-1 4356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14401-15034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4401 -1 5034 bp Feature: domain Description: YkfC Location: 15235-15397 bp Feature: domain Description: YkfC Location: 1 5235-1 5397 bp Feature: domain Description: HNH Note: nucleases Location: 15574-15712 bp Feature: domain Description: HNH Note: nucleases Location: 1 5574-1 571 2 bp Feature: gene Location: 15870-16376 bp Feature: domain Description: def Location: 15873-16359 bp Feature: domain Description: def Location: 1 5873-1 6359 bp Feature: gene Location: 16437-17369 bp Feature: domain Description: fmt Location: 16440-17358 bp Feature: domain Description: fmt Location: 1 6440-1 7358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10634 (L-threonylcarbamoyladenylate synthase type 1 TsaC), Smf (COG0758), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), def (PRK00150), fmt (TIGR00460)

Seq: WOWR01000033.1 Pseudomonas putida strain BOE100 Contig_35.35_PputBOE100_Contig_35.35, whole genome shotgun sequence (75495 bp)
Overview 1 RT 1: 54997-58417 bp Neighborhood of RT #1 [54997, 58434] IS5 RVT-GII GIIM IS5 DUF3077 Feature: gene Location: 54997-55539 bp Feature: domain Description: IS5 Location: 55183-55516 bp Feature: domain Description: IS5 Location: 55183-55516 bp Feature: gene Location: 55685-55822 bp Feature: gene Location: 56034-57287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56247-56904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562 47-56904 bp Feature: domain Description: GIIM Note: maturase Location: 56982-57204 bp Feature: domain Description: GIIM Note: maturase Location: 56982 -572 04 bp Feature: gene Location: 57298-57840 bp Feature: domain Description: IS5 Location: 57370-57787 bp Feature: domain Description: IS5 Location: 57370-57787 bp Feature: gene Location: 58171-58434 bp Feature: domain Description: DUF3077 Location: 58198-58417 bp Feature: domain Description: DUF3077 Location: 58198-58417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), RVT-GII, GIIM (pfam08388), DUF3077 (pfam11275)