myRT

myRT report for GCA_009746725.1_ASM974672v1

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Seq: WEIK01000002.1 Pseudomonas monteilii strain 597/14 88B9_c0002, whole genome shotgun sequence (383586 bp)
Overview 1 RT 1: 76922-85202 bp Neighborhood of RT #1 [76922, 85252] PilN PilM RVT_N RVT-GII GIIM HNH MrcA PRK07232 Feature: gene Location: 76922-77458 bp Feature: domain Description: PilN Location: 76925-77399 bp Feature: domain Description: PilN Location: 76925-77399 bp Feature: gene Location: 77455-78636 bp Feature: domain Description: PilM Location: 77758-78289 bp Feature: domain Description: PilM Location: 77758-78289 bp Feature: gene Location: 79537-81243 bp Feature: RT Description: RVT_N Location: 79594-79837 bp Feature: RT Description: RVT_N Location: 79594-79837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79882-80518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79882-8051 8 bp Feature: domain Description: GIIM Note: maturase Location: 80569-80803 bp Feature: domain Description: GIIM Note: maturase Location: 80569-80803 bp Feature: domain Description: HNH Note: nucleases Location: 81055-81193 bp Feature: domain Description: HNH Note: nucleases Location: 81 055-81 1 93 bp Feature: gene Location: 81297-83825 bp Feature: domain Description: MrcA Location: 81378-83751 bp Feature: domain Description: MrcA Location: 81 378-83751 bp Feature: gene Location: 83975-85252 bp Feature: domain Description: PRK07232 Location: 83993-85202 bp Feature: domain Description: PRK07232 Location: 83993-85202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PilN (pfam05137), PilM (pfam07419), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), MrcA (COG5009), PRK07232 (bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed)

Seq: WEIK01000010.1 Pseudomonas monteilii strain 597/14 88B9_c0010, whole genome shotgun sequence (206923 bp)
Overview 1 RT 1: 87364-93741 bp Neighborhood of RT #1 [87364, 93758] SUA5 Smf RVT_N RVT-GII YkfC HNHc def fmt Feature: gene Location: 87364-87921 bp Feature: domain Description: SUA5 Location: 87382-87919 bp Feature: domain Description: SUA5 Location: 87382 -87919 bp Feature: gene Location: 87964-89061 bp Feature: domain Description: Smf Location: 88000-89053 bp Feature: domain Description: Smf Location: 88000-89053 bp Feature: gene Location: 90445-92151 bp Feature: RT Description: RVT_N Location: 90502-90745 bp Feature: RT Description: RVT_N Location: 90502 -90745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90790-91426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90790-9142 6 bp Feature: domain Description: YkfC Location: 91633-91786 bp Feature: domain Description: YkfC Location: 91633-91786 bp Feature: domain Description: HNHc Note: nucleases Location: 91939-92095 bp Feature: domain Description: HNHc Note: nucleases Location: 91939-92 095 bp Feature: gene Location: 92260-92766 bp Feature: domain Description: def Location: 92263-92749 bp Feature: domain Description: def Location: 92 2 63-92 749 bp Feature: gene Location: 92826-93758 bp Feature: domain Description: fmt Location: 92829-93741 bp Feature: domain Description: fmt Location: 92 82 9-93741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SUA5 (pfam03481), Smf (COG0758), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), def (PRK00150), fmt (TIGR00460)

Seq: WEIK01000017.1 Pseudomonas monteilii strain 597/14 88B9_c0017, whole genome shotgun sequence (126092 bp)
Overview 1 RT 1: 93516-95822 bp Neighborhood of RT #1 [93516, 96214] SsuA_fam InsE RVT-GII Feature: gene Location: 93516-93851 bp Feature: domain Description: SsuA_fam Location: 93522-93834 bp Feature: domain Description: SsuA_fam Location: 93 522-93 83 4 bp Feature: gene Location: 94017-94262 bp Feature: domain Description: InsE Location: 94023-94230 bp Feature: domain Description: InsE Location: 94023 -9423 0 bp Feature: gene Location: 94448-96214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95132-95822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9513 2-95822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SsuA_fam (TIGR01728), InsE (COG2963), RVT-GII