myRT

myRT report for GCA_009755815.1_ASM975581v1

Download annotations/find similar RTs

Seq: WRPK01000013.1 Sphingomonas formosensis strain CC-Nfb-2 NODE_13_length_196319_cov_33.760981_cov_33.760981, whole genome shotgun sequence (196319 bp)
Overview 1 RT 1: 110428-115392 bp Neighborhood of RT #1 [110428, 115409] RVT-Retrons PRK09692 DUF3606 Feature: gene Location: 110428-111324 bp Feature: gene Location: 111321-112448 bp Feature: gene Location: 112648-113676 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 112873-113515 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 2873-1 1 351 5 bp Feature: gene Location: 113726-115144 bp Feature: domain Description: PRK09692 Location: 113807-115013 bp Feature: domain Description: PRK09692 Location: 1 1 3807-1 1 501 3 bp Feature: gene Location: 115227-115409 bp Feature: domain Description: DUF3606 Location: 115239-115392 bp Feature: domain Description: DUF3606 Location: 1 1 5239-1 1 5392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK09692 (Integrase; provisional), DUF3606 (pfam12244)

Seq: WRPK01000006.1 Sphingomonas formosensis strain CC-Nfb-2 NODE_6_length_412528_cov_34.096890_cov_34.096890, whole genome shotgun sequence (412528 bp)
Overview 1 RT 1: 381308-384148 bp Neighborhood of RT #1 [381308, 384159] HTH_XRE RVT-Retrons BaeS Feature: gene Location: 381308-381481 bp Feature: gene Location: 381518-381823 bp Feature: domain Description: HTH_XRE Location: 381527-381692 bp Feature: domain Description: HTH_XRE Location: 38152 7-381692 bp Feature: gene Location: 381921-382688 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 381960-382491 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 381960-382 491 bp Feature: gene Location: 383179-383451 bp Feature: gene Location: 383587-384159 bp Feature: domain Description: BaeS Location: 383665-384148 bp Feature: domain Description: BaeS Location: 383665-384148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, BaeS (COG0642)