myRT

myRT report for GCA_009758205.1_ASM975820v1

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Seq: WRXN01000012.1 Chitinophaga sp. ysch24 NODE_12_length_280973_cov_24.228734, whole genome shotgun sequence (280973 bp)
Overview 1 RT 1: 44938-50359 bp Neighborhood of RT #1 [44938, 50359] CypX RVT-Retrons Feature: gene Location: 44938-46101 bp Feature: domain Description: CypX Location: 44953-46090 bp Feature: domain Description: CypX Location: 44953-46090 bp Feature: gene Location: 46308-46667 bp Feature: gene Location: 46759-48243 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47302-47917 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47302-4791 7 bp Feature: gene Location: 48371-48517 bp Feature: gene Location: 48704-50359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CypX (COG2124), RVT-Retrons

Seq: WRXN01000042.1 Chitinophaga sp. ysch24 NODE_45_length_1935_cov_98.339602, whole genome shotgun sequence (1935 bp)
Overview 1 RT 1: 80-1932 bp Neighborhood of RT #1 [80, 1932] RVT-GII GIIM Feature: gene Location: 80-1348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281-899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 81-899 bp Feature: domain Description: GIIM Note: maturase Location: 953-1154 bp Feature: domain Description: GIIM Note: maturase Location: 953-1154 bp Feature: gene Location: 1495-1698 bp Feature: gene Location: 1753-1932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WRXN01000007.1 Chitinophaga sp. ysch24 NODE_7_length_391209_cov_25.208074, whole genome shotgun sequence (391209 bp)
Overview 1 RT 1: 200321-204309 bp Neighborhood of RT #1 [200321, 204809] RVT-GII GIIM PinE Recombinase Zn_ribbon_recom Feature: gene Location: 200321-201079 bp Feature: gene Location: 201083-201211 bp Feature: gene Location: 201616-202923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201880-202555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201880-202555 bp Feature: domain Description: GIIM Note: maturase Location: 202630-202840 bp Feature: domain Description: GIIM Note: maturase Location: 20263 0-202840 bp Feature: gene Location: 203038-203304 bp Feature: gene Location: 203502-204809 bp Feature: domain Description: PinE Location: 203565-203853 bp Feature: domain Description: PinE Location: 203 565-203 853 bp Feature: domain Description: Recombinase Location: 203883-204135 bp Feature: domain Description: Recombinase Location: 203 883 -20413 5 bp Feature: domain Description: Zn_ribbon_recom Location: 204186-204309 bp Feature: domain Description: Zn_ribbon_recom Location: 204186-2043 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PinE (COG1961), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)