myRT

myRT report for GCA_009760915.1_ASM976091v1

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Seq: VIDQ01000016.1 Azohydromonas sp. 13393 Scaffold16, whole genome shotgun sequence (107290 bp)
Overview 1 RT 1: 93516-99452 bp Neighborhood of RT #1 [93516, 99463] COG4391 PRK06606 RVT_N RVT-GII GIIM HNHc PRK11823 Feature: gene Location: 93516-93728 bp Feature: domain Description: COG4391 Location: 93585-93699 bp Feature: domain Description: COG4391 Location: 93585-93699 bp Feature: gene Location: 93748-94671 bp Feature: domain Description: PRK06606 Location: 93757-94669 bp Feature: domain Description: PRK06606 Location: 93757-94669 bp Feature: gene Location: 94830-96536 bp Feature: RT Description: RVT_N Location: 94887-95130 bp Feature: RT Description: RVT_N Location: 94887-951 30 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95178-95826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951 78-95826 bp Feature: domain Description: GIIM Note: maturase Location: 95877-96111 bp Feature: domain Description: GIIM Note: maturase Location: 95877-961 1 1 bp Feature: domain Description: HNHc Note: nucleases Location: 96342-96492 bp Feature: domain Description: HNHc Note: nucleases Location: 96342-96492 bp Feature: gene Location: 97622-98065 bp Feature: gene Location: 98093-99463 bp Feature: domain Description: PRK11823 Location: 98096-99452 bp Feature: domain Description: PRK1 1 823 Location: 98096-99452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4391 (Uncharacterized conserved protein, contains Zn-finger domain ), PRK06606 (branched-chain amino acid transaminase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK11823 (DNA repair protein RadA; Provisional)

Seq: VIDQ01000087.1 Azohydromonas sp. 13393 Scaffold87, whole genome shotgun sequence (28910 bp)
Overview 1 RT 1: 18416-22120 bp Neighborhood of RT #1 [18416, 22206] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII RVT-GII GIIM INT_RitC_C_like Feature: gene Location: 18416-18865 bp Feature: gene Location: 18948-19529 bp Feature: domain Description: DDE_Tnp_IS66 Location: 19254-19335 bp Feature: domain Description: DDE_Tnp_IS66 Location: 192 54-19335 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 19356-19464 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 19356-19464 bp Feature: gene Location: 19781-20326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20024-20294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 002 4-2 02 94 bp Feature: gene Location: 20323-21063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20326-20689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 032 6-2 0689 bp Feature: domain Description: GIIM Note: maturase Location: 20755-20965 bp Feature: domain Description: GIIM Note: maturase Location: 2 0755-2 0965 bp Feature: gene Location: 21083-21556 bp Feature: gene Location: 21658-22206 bp Feature: domain Description: INT_RitC_C_like Location: 21661-22120 bp Feature: domain Description: INT_RitC_C_like Location: 2 1661-2 2 12 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), INT_RitC_C_like (cd01182)