myRT

myRT report for GCA_009761955.1_ASM976195v1

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Seq: WSHI01000027.1 Escherichia coli strain TzEc044 NODE_27_length_48119_cov_33.7071, whole genome shotgun sequence (48119 bp)
Overview 1 RT 1: 42680-48117 bp Neighborhood of RT #1 [42680, 48117] PRK09692 RVT-UG5 nitrilase Feature: gene Location: 42680-42904 bp Feature: gene Location: 43049-44305 bp Feature: domain Description: PRK09692 Location: 43058-44261 bp Feature: domain Description: PRK09692 Location: 43058-44261 bp Feature: gene Location: 44397-47273 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 44871-45399 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 44871 -45399 bp Feature: domain Description: nitrilase Location: 46611-47193 bp Feature: domain Description: nitrilase Location: 4661 1 -471 93 bp Feature: gene Location: 47270-47959 bp Feature: gene Location: 47965-48117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424)

Seq: WSHI01000030.1 Escherichia coli strain TzEc044 NODE_30_length_31831_cov_30.0711, whole genome shotgun sequence (31831 bp)
Overview 1 RT 1: 26420-31829 bp Neighborhood of RT #1 [26420, 31829] proA PRK09692 RVT-UG7 Feature: gene Location: 26420-27673 bp Feature: domain Description: proA Location: 26447-27638 bp Feature: domain Description: proA Location: 2 6447-2 7638 bp Feature: gene Location: 28028-29212 bp Feature: domain Description: PRK09692 Location: 28034-29189 bp Feature: domain Description: PRK09692 Location: 2 8034-2 9189 bp Feature: gene Location: 29205-30833 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 29613-30042 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 9613-30042 bp Feature: gene Location: 30830-31570 bp Feature: gene Location: 31680-31829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7

Seq: WSHI01000055.1 Escherichia coli strain TzEc044 NODE_55_length_2272_cov_169.302, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)