myRT

myRT report for GCA_009763315.1_ASM976331v1

Download annotations/find similar RTs

Seq: WMCH01000116.1 Klebsiella pneumoniae strain EN5218 NODE_14_length_1832_cov_257.570953, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1721 bp Neighborhood of RT #1 [61, 1721] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1 1 56 bp Feature: gene Location: 1554-1721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WMCH01000168.1 Klebsiella pneumoniae strain EN5218 NODE_370_length_151769_cov_104.355827, whole genome shotgun sequence (151831 bp)
Overview 1 RT 1: 32142-38995 bp Neighborhood of RT #1 [32142, 39012] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32142-32807 bp Feature: domain Description: INT_P4_C Location: 32247-32805 bp Feature: domain Description: INT_P4_C Location: 32 2 47-32 805 bp Feature: gene Location: 33068-33508 bp Feature: domain Description: Integrase_1 Location: 33074-33290 bp Feature: domain Description: Integrase_1 Location: 33074-332 90 bp Feature: gene Location: 33565-35643 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33973-34417 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33973-34417 bp Feature: gene Location: 35643-38252 bp Feature: domain Description: FimD Location: 35700-38241 bp Feature: domain Description: FimD Location: 35700-382 41 bp Feature: gene Location: 38284-39012 bp Feature: domain Description: FimC Location: 38332-38995 bp Feature: domain Description: FimC Location: 38332 -38995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)