myRT

myRT report for GCA_009765305.1_ASM976530v1

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Seq: VSLC01000022.1 Klebsiella pneumoniae strain EN5199 NODE_22_length_73567_cov_20.2777_pilon_SHARMI-811, whole genome shotgun sequence (73567 bp)
Overview 1 RT 1: 31991-38844 bp Neighborhood of RT #1 [31991, 38861] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31991-32656 bp Feature: domain Description: INT_P4_C Location: 32096-32654 bp Feature: domain Description: INT_P4_C Location: 32096-32654 bp Feature: gene Location: 32917-33357 bp Feature: domain Description: Integrase_1 Location: 32923-33139 bp Feature: domain Description: Integrase_1 Location: 32923-331 39 bp Feature: gene Location: 33414-35492 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33822-34266 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33822-34266 bp Feature: gene Location: 35492-38101 bp Feature: domain Description: FimD Location: 35549-38090 bp Feature: domain Description: FimD Location: 35549-38090 bp Feature: gene Location: 38133-38861 bp Feature: domain Description: FimC Location: 38181-38844 bp Feature: domain Description: FimC Location: 381 81 -38844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: VSLC01000024.1 Klebsiella pneumoniae strain EN5199 NODE_24_length_65742_cov_9.15304_pilon_SHARMI-811, whole genome shotgun sequence (65742 bp)
Overview 1 RT 1: 52594-56792 bp Neighborhood of RT #1 [52594, 56794] RVT_N RVT-GII GIIM HNHc DUF1380 Antirestrict Feature: gene Location: 52594-52851 bp Feature: gene Location: 52882-53157 bp Feature: gene Location: 53731-55398 bp Feature: domain Description: RVT_N Location: 53779-54016 bp Feature: domain Description: RVT_N Location: 53779-54016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54067-54709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54067-54709 bp Feature: domain Description: GIIM Note: maturase Location: 54760-54994 bp Feature: domain Description: GIIM Note: maturase Location: 54760-54994 bp Feature: domain Description: HNHc Note: nucleases Location: 55204-55363 bp Feature: domain Description: HNHc Note: nucleases Location: 552 04-55363 bp Feature: gene Location: 55900-56322 bp Feature: domain Description: DUF1380 Location: 55903-56200 bp Feature: domain Description: DUF1380 Location: 55903-562 00 bp Feature: gene Location: 56369-56794 bp Feature: domain Description: Antirestrict Location: 56504-56792 bp Feature: domain Description: Antirestrict Location: 56504-56792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128), Antirestrict (pfam03230)

Seq: VSLC01000080.1 Klebsiella pneumoniae strain EN5199 NODE_80_length_1892_cov_140.392_pilon_SHARMI-811, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII