myRT

myRT report for GCA_009766705.1_ASM976670v1

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Seq: WSIJ01000027.1 Escherichia coli strain TzEc017 NODE_27_length_42265_cov_47.4232, whole genome shotgun sequence (42265 bp)
Overview 1 RT 1: 3-7324 bp Neighborhood of RT #1 [3, 7326] Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Phage_fiber Caudo_TAP RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 3-2267 bp Feature: domain Description: Phage_fiber_2 Location: 306-426 bp Feature: domain Description: Phage_fiber_2 Location: 306-426 bp Feature: domain Description: Collar Location: 1638-1776 bp Feature: domain Description: Collar Location: 1 638-1 776 bp Feature: domain Description: Phage_fiber Location: 1827-1866 bp Feature: domain Description: Phage_fiber Location: 1 827-1 866 bp Feature: domain Description: Phage_fiber Location: 1923-1962 bp Feature: domain Description: Phage_fiber Location: 1 923-1 962 bp Feature: domain Description: Phage_fiber Location: 1968-1995 bp Feature: domain Description: Phage_fiber Location: 1 968-1 995 bp Feature: domain Description: Phage_fiber Location: 2070-2109 bp Feature: domain Description: Phage_fiber Location: 2070-21 09 bp Feature: domain Description: Phage_fiber Location: 2115-2148 bp Feature: domain Description: Phage_fiber Location: 21 1 5-21 48 bp Feature: gene Location: 2267-2851 bp Feature: domain Description: Caudo_TAP Location: 2483-2840 bp Feature: domain Description: Caudo_TAP Location: 2483-2840 bp Feature: gene Location: 3296-4900 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3587-4178 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3587-41 78 bp Feature: domain Description: TIR_2 Location: 4505-4793 bp Feature: domain Description: TIR_2 Location: 4505-4793 bp Feature: gene Location: 5260-5520 bp Feature: domain Description: PRK10597 Location: 5263-5503 bp Feature: domain Description: PRK1 0597 Location: 5263-5503 bp Feature: gene Location: 5740-7326 bp Feature: domain Description: prfC Location: 5758-7324 bp Feature: domain Description: prfC Location: 5758-7324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Caudo_TAP (pfam02413), Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335), RVT-Retrons, TIR_2 (pfam13676), PRK10597 (DNA damage-inducible protein I; Provisional), prfC (TIGR00503)

Seq: WSIJ01000394.1 Escherichia coli strain TzEc017 NODE_395_length_769_cov_1.34268, whole genome shotgun sequence (769 bp)
Overview 1 RT 1: 306-759 bp Neighborhood of RT #1 [306, 767] RVT-GII Feature: gene Location: 306-767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579-759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579-759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII