myRT

myRT report for GCA_009771865.1_ASM977186v1

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Seq: WNJE01000026.1 Streptococcus agalactiae strain M171 NODE_26_length_14298_cov_138.357651, whole genome shotgun sequence (14298 bp)
Overview 1 RT 1: 3467-12344 bp Neighborhood of RT #1 [3467, 12412] Peptidases_S8_C5a_Peptidase fn3_5 CHU_C RVT-GII GIIM AdcA strep_his_triad strep_his_triad strep_his_triad Feature: gene Location: 3467-6739 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 3812-5210 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 381 2-521 0 bp Feature: domain Description: fn3_5 Location: 5258-5588 bp Feature: domain Description: fn3_5 Location: 5258-5588 bp Feature: domain Description: CHU_C Location: 5924-6218 bp Feature: domain Description: CHU_C Location: 5924-621 8 bp Feature: gene Location: 7235-7396 bp Feature: gene Location: 7467-8777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7704-8319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7704-831 9 bp Feature: domain Description: GIIM Note: maturase Location: 8373-8589 bp Feature: domain Description: GIIM Note: maturase Location: 8373-8589 bp Feature: gene Location: 9011-9931 bp Feature: domain Description: AdcA Location: 9104-9929 bp Feature: domain Description: AdcA Location: 91 04-9929 bp Feature: gene Location: 9944-12412 bp Feature: domain Description: strep_his_triad Location: 9947-11063 bp Feature: domain Description: strep_his_triad Location: 9947-1 1 063 bp Feature: domain Description: strep_his_triad Location: 11201-11732 bp Feature: domain Description: strep_his_triad Location: 1 1 201 -1 1 732 bp Feature: domain Description: strep_his_triad Location: 11900-12344 bp Feature: domain Description: strep_his_triad Location: 1 1 900-1 2344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidases_S8_C5a_Peptidase (cd07475), fn3_5 (pfam06280), CHU_C (pfam13585), RVT-GII, GIIM (pfam08388), AdcA (cd01017), strep_his_triad (TIGR01363)

Seq: WNJE01000003.1 Streptococcus agalactiae strain M171 NODE_3_length_173326_cov_146.743588, whole genome shotgun sequence (173326 bp)
Overview 1 RT 1: 10517-20686 bp Neighborhood of RT #1 [10517, 20686] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 10517-11068 bp Feature: gene Location: 11118-16559 bp Feature: domain Description: N6_Mtase Location: 13110-13701 bp Feature: domain Description: N6_Mtase Location: 13110-13701 bp Feature: domain Description: COG4646 Location: 14292-16416 bp Feature: domain Description: COG4646 Location: 142 92 -16416 bp Feature: gene Location: 17057-18835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17318-18110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17318-18110 bp Feature: domain Description: Intron_maturas2 Location: 18215-18446 bp Feature: domain Description: Intron_maturas2 Location: 182 15-18446 bp Feature: domain Description: HNHc Note: nucleases Location: 18611-18797 bp Feature: domain Description: HNHc Note: nucleases Location: 18611-18797 bp Feature: gene Location: 18973-20316 bp Feature: domain Description: KOG1000 Location: 19252-19567 bp Feature: domain Description: KOG1000 Location: 192 52 -19567 bp Feature: gene Location: 20387-20686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: WNJE01000040.1 Streptococcus agalactiae strain M171 NODE_40_length_2312_cov_825.102032, whole genome shotgun sequence (2312 bp)
Overview 1 RT 1: 529-1861 bp Neighborhood of RT #1 [529, 2226] RVT_N RVT-GII GIIM Feature: gene Location: 529-2226 bp Feature: RT Description: RVT_N Location: 625-865 bp Feature: RT Description: RVT_N Location: 625-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913 -1573 bp Feature: domain Description: GIIM Note: maturase Location: 1642-1861 bp Feature: domain Description: GIIM Note: maturase Location: 1642-1861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)