myRT

myRT report for GCA_009773495.1_ASM977349v1

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Seq: WSXW01000009.1 Firmicutes bacterium isolate X3_MetaBAT.12 scaffold_356, whole genome shotgun sequence (61058 bp)
Overview 1 RT 1: 50646-53330 bp Neighborhood of RT #1 [50646, 53344] type_I_hlyD RVT-GII ABC_Class3 TupA Feature: gene Location: 50646-51275 bp Feature: domain Description: type_I_hlyD Location: 50697-51270 bp Feature: domain Description: type_I_hlyD Location: 50697-51 270 bp Feature: gene Location: 51336-51467 bp Feature: gene Location: 51532-51894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51538-51619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 538-51 61 9 bp Feature: gene Location: 51909-52649 bp Feature: domain Description: ABC_Class3 Location: 51915-52542 bp Feature: domain Description: ABC_Class3 Location: 51 91 5-52542 bp Feature: gene Location: 52649-53344 bp Feature: domain Description: TupA Location: 52661-53330 bp Feature: domain Description: TupA Location: 52661 -53330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT type_I_hlyD (TIGR01843), RVT-GII, ABC_Class3 (cd03229), TupA (COG4662)

Seq: WSXW01000002.1 Firmicutes bacterium isolate X3_MetaBAT.12 scaffold_39, whole genome shotgun sequence (166567 bp)
Overview 1 RT 1: 103629-109846 bp Neighborhood of RT #1 [103629, 109866] RVT-GII GIIM valS FolC Feature: gene Location: 103629-103976 bp Feature: gene Location: 104059-104235 bp Feature: gene Location: 104457-105863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104820-105438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10482 0-105438 bp Feature: domain Description: GIIM Note: maturase Location: 105489-105594 bp Feature: domain Description: GIIM Note: maturase Location: 105489-105594 bp Feature: gene Location: 105968-108607 bp Feature: domain Description: valS Location: 105977-108605 bp Feature: domain Description: valS Location: 105977-108605 bp Feature: gene Location: 108769-109866 bp Feature: domain Description: FolC Location: 108772-109846 bp Feature: domain Description: FolC Location: 108772 -109846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), valS (TIGR00422), FolC (COG0285)

Seq: WSXW01000020.1 Firmicutes bacterium isolate X3_MetaBAT.12 scaffold_902, whole genome shotgun sequence (34609 bp)
Overview 1 RT 1: 207-5096 bp Neighborhood of RT #1 [207, 5104] PRK08582 RVT-GII GIIM PRK06224 aroD Feature: gene Location: 207-581 bp Feature: domain Description: PRK08582 Location: 210-450 bp Feature: domain Description: PRK08582 Location: 210-450 bp Feature: gene Location: 1064-1213 bp Feature: gene Location: 1216-2643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1579-2197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1579-2197 bp Feature: domain Description: GIIM Note: maturase Location: 2248-2464 bp Feature: domain Description: GIIM Note: maturase Location: 2248-2464 bp Feature: gene Location: 3406-4284 bp Feature: domain Description: PRK06224 Location: 3463-4261 bp Feature: domain Description: PRK06224 Location: 3 463 -4261 bp Feature: gene Location: 4274-5104 bp Feature: domain Description: aroD Location: 4355-5096 bp Feature: domain Description: aroD Location: 43 55-5096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK08582 (RNA-binding protein S1), aroD (TIGR01093)