myRT

myRT report for GCA_009774035.1_ASM977403v1

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Seq: VSNA01000322.1 Clostridiales bacterium isolate SC1168_S21_bin.24 SC1168_S21_SC1168_S21_bin.24_contig_322, whole genome shotgun sequence (6627 bp)
Overview 1 RT 1: 96-4600 bp Neighborhood of RT #1 [96, 4600] RVT-DGRs Feature: gene Location: 96-467 bp Feature: gene Location: 483-1841 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 687-1281 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 687-1 281 bp Feature: gene Location: 2423-3919 bp Feature: gene Location: 3953-4600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VSNA01000324.1 Clostridiales bacterium isolate SC1168_S21_bin.24 SC1168_S21_SC1168_S21_bin.24_contig_324, whole genome shotgun sequence (38043 bp)
Overview 1 RT 1: 10000-21508 bp Neighborhood of RT #1 [10000, 21508] RVT-DGRs Feature: gene Location: 10000-10515 bp Feature: gene Location: 10527-18704 bp Feature: gene Location: 18771-20525 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19371-19998 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19371-19998 bp Feature: gene Location: 20539-21036 bp Feature: gene Location: 21041-21508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VSNA01000326.1 Clostridiales bacterium isolate SC1168_S21_bin.24 SC1168_S21_SC1168_S21_bin.24_contig_326, whole genome shotgun sequence (30453 bp)
Overview 1 RT 1: 8589-12402 bp Neighborhood of RT #1 [8589, 12402] DUF1896 TraG-D_C RVT_N RVT-GII GIIM Feature: gene Location: 8589-9044 bp Feature: domain Description: DUF1896 Location: 8625-9042 bp Feature: domain Description: DUF1896 Location: 8625-9042 bp Feature: gene Location: 9067-10278 bp Feature: domain Description: TraG-D_C Location: 9649-9982 bp Feature: domain Description: TraG-D_C Location: 9649-9982 bp Feature: gene Location: 10283-11935 bp Feature: RT Description: RVT_N Location: 10337-10580 bp Feature: RT Description: RVT_N Location: 103 3 7-10580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10625-11273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10625-11273 bp Feature: domain Description: GIIM Note: maturase Location: 11327-11558 bp Feature: domain Description: GIIM Note: maturase Location: 113 27-11558 bp Feature: gene Location: 12101-12235 bp Feature: gene Location: 12253-12402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF1896 (pfam08989), TraG-D_C (pfam12696)

Seq: VSNA01000335.1 Clostridiales bacterium isolate SC1168_S21_bin.24 SC1168_S21_SC1168_S21_bin.24_contig_335, whole genome shotgun sequence (7461 bp)
Overview 1 RT 1: 1-7216 bp Neighborhood of RT #1 [1, 7458] Laminin_G_3 pfam08757 RVT-DGRs Feature: gene Location: 1-5970 bp Feature: domain Description: Laminin_G_3 Location: 1639-2062 bp Feature: domain Description: Laminin_G_3 Location: 1639-2062 bp Feature: domain Description: pfam08757 Location: 2863-3193 bp Feature: domain Description: pfam08757 Location: 2863-3193 bp Feature: gene Location: 6088-6267 bp Feature: gene Location: 6397-7458 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6613-7216 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6613-7216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), pfam08757 (CotH;CotH kinase protein), RVT-DGRs

Seq: VSNA01000371.1 Clostridiales bacterium isolate SC1168_S21_bin.24 SC1168_S21_SC1168_S21_bin.24_contig_371, whole genome shotgun sequence (2311 bp)
Overview 1 RT 1: 2-2308 bp Neighborhood of RT #1 [2, 2308] RVT-DGRs Feature: gene Location: 2-301 bp Feature: gene Location: 279-1277 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 444-1065 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 444-1065 bp Feature: gene Location: 1298-1714 bp Feature: gene Location: 1850-2308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs