myRT

myRT report for GCA_009774255.1_ASM977425v1

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Seq: VSNK01000149.1 Faecalicatena sp. isolate S9763_S15_bin.9 S9763_S15_bin.9_contig_149, whole genome shotgun sequence (13679 bp)
Overview 1 RT 1: 8098-13038 bp Neighborhood of RT #1 [8098, 13085] T4SS-DNA_transf RVT-GII Intron_maturas2 VirD4 DUF4314 Feature: gene Location: 8098-8463 bp Feature: gene Location: 8478-8885 bp Feature: domain Description: T4SS-DNA_transf Location: 8559-8721 bp Feature: domain Description: T4SS-DNA_transf Location: 8559-8721 bp Feature: gene Location: 8898-10724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9165-10002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 65-1 0002 bp Feature: domain Description: Intron_maturas2 Location: 10110-10365 bp Feature: domain Description: Intron_maturas2 Location: 1 01 1 0-1 0365 bp Feature: gene Location: 11329-12759 bp Feature: domain Description: VirD4 Location: 11524-12736 bp Feature: domain Description: VirD4 Location: 1 1 524-1 2736 bp Feature: gene Location: 12783-13085 bp Feature: domain Description: DUF4314 Location: 12843-13038 bp Feature: domain Description: DUF431 4 Location: 1 2843-1 3038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), DUF4314 (pfam14192), T4SS-DNA_transf (pfam02534), RVT-GII, Intron_maturas2 (pfam01348)

Seq: VSNK01000020.1 Faecalicatena sp. isolate S9763_S15_bin.9 S9763_S15_bin.9_contig_20, whole genome shotgun sequence (36901 bp)
Overview 1 RT 1: 1310-5228 bp Neighborhood of RT #1 [1310, 5233] INT_RitB_C_like Phage_int_SAM_5 INT_RitC_C_like RVT-GII GIIM YesN YesN Feature: gene Location: 1310-2263 bp Feature: domain Description: INT_RitB_C_like Location: 1694-2201 bp Feature: domain Description: INT_RitB_C_like Location: 1694-2 2 01 bp Feature: gene Location: 2256-3275 bp Feature: domain Description: Phage_int_SAM_5 Location: 2301-2568 bp Feature: domain Description: Phage_int_SAM_5 Location: 2 301-2 568 bp Feature: domain Description: INT_RitC_C_like Location: 2649-3207 bp Feature: domain Description: INT_RitC_C_like Location: 2 649-32 07 bp Feature: gene Location: 3426-3950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3438-3594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3438-3594 bp Feature: domain Description: GIIM Note: maturase Location: 3654-3876 bp Feature: domain Description: GIIM Note: maturase Location: 3654-3876 bp Feature: gene Location: 4044-4190 bp Feature: gene Location: 4448-5233 bp Feature: domain Description: YesN Location: 4454-4883 bp Feature: domain Description: YesN Location: 4454-4883 bp Feature: domain Description: YesN Location: 4883-5228 bp Feature: domain Description: YesN Location: 4883-52 2 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_5 (pfam13102), INT_RitC_C_like (cd01182), RVT-GII, GIIM (pfam08388), YesN (COG4753)

Seq: VSNK01000215.1 Faecalicatena sp. isolate S9763_S15_bin.9 S9763_S15_bin.9_contig_215, whole genome shotgun sequence (9531 bp)
Overview 1 RT 1: 8449-9395 bp Neighborhood of RT #1 [8449, 9454] RVT-GII Feature: gene Location: 8449-8628 bp Feature: gene Location: 8758-8892 bp Feature: gene Location: 8894-9454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8897-9395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8897-93 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VSNK01000382.1 Faecalicatena sp. isolate S9763_S15_bin.9 S9763_S15_bin.9_contig_382, whole genome shotgun sequence (4220 bp)
Overview 1 RT 1: 911-4210 bp Neighborhood of RT #1 [911, 4218] Beta-lactamase2 Beta-lactamase2 RVT-Retrons PRK05912 Feature: gene Location: 911-2065 bp Feature: domain Description: Beta-lactamase2 Location: 1463-1544 bp Feature: domain Description: Beta-lactamase2 Location: 14 63-154 4 bp Feature: domain Description: Beta-lactamase2 Location: 1733-1979 bp Feature: domain Description: Beta-lactamase2 Location: 1733-1979 bp Feature: gene Location: 2070-2294 bp Feature: gene Location: 2291-3361 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2456-3011 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24 56-3011 bp Feature: gene Location: 3430-3786 bp Feature: gene Location: 3910-4218 bp Feature: domain Description: PRK05912 Location: 3916-4210 bp Feature: domain Description: PRK05912 Location: 3916-4 210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK05912 (tyrosyl-tRNA synthetase; Validated), Beta-lactamase2 (pfam13354)