myRT

myRT report for GCA_009774495.1_ASM977449v1

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Seq: VSNW01000445.1 Lachnospiraceae bacterium isolate SC1114_S20_bin.17 SC1114_S20_SC1114_S20_bin.17_contig_445, whole genome shotgun sequence (2801 bp)
Overview 1 RT 1: 3-2784 bp Neighborhood of RT #1 [3, 2798] COG5421 COG5421 RVT-Retrons C_GCAxxG_C_C Feature: gene Location: 3-1778 bp Feature: domain Description: COG5421 Location: 705-1005 bp Feature: domain Description: COG5421 Location: 705-1 005 bp Feature: domain Description: COG5421 Location: 1449-1635 bp Feature: domain Description: COG5421 Location: 1 449-1 635 bp Feature: gene Location: 1782-2450 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1869-2040 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 869-2040 bp Feature: gene Location: 2550-2798 bp Feature: domain Description: C_GCAxxG_C_C Location: 2604-2784 bp Feature: domain Description: C_GCAxxG_C_C Location: 2604-2784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), RVT-Retrons, C_GCAxxG_C_C (TIGR01909)

Seq: VSNW01000597.1 Lachnospiraceae bacterium isolate SC1114_S20_bin.17 SC1114_S20_SC1114_S20_bin.17_contig_597, whole genome shotgun sequence (2082 bp)
Overview 1 RT 1: 2-1635 bp Neighborhood of RT #1 [2, 1943] RVT-DGRs Feature: gene Location: 2-742 bp Feature: gene Location: 654-1943 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 987-1635 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 987-1635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs