myRT

myRT report for GCA_009774655.1_ASM977465v1

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Seq: VSOD01000513.1 Lachnospiraceae bacterium isolate SC1175_S28_bin.2 SC1175_S28_SC1175_S28_bin.2_contig_513, whole genome shotgun sequence (3067 bp)
Overview 1 RT 1: 423-2306 bp Neighborhood of RT #1 [423, 2470] RVT-GII RVT-GII YhhI Feature: gene Location: 423-701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567-699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567-699 bp Feature: gene Location: 946-1182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 949-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 949-1 1 56 bp Feature: gene Location: 1305-1535 bp Feature: gene Location: 2045-2470 bp Feature: domain Description: YhhI Location: 2135-2306 bp Feature: domain Description: YhhI Location: 21 35-2306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YhhI (COG5433)

Seq: VSOD01000088.1 Lachnospiraceae bacterium isolate SC1175_S28_bin.2 SC1175_S28_SC1175_S28_bin.2_contig_88, whole genome shotgun sequence (12575 bp)
Overview 1 RT 1: 7451-12214 bp Neighborhood of RT #1 [7451, 12214] HTH_17 FtsK RVT-UNC Feature: gene Location: 7451-7633 bp Feature: domain Description: HTH_17 Location: 7472-7571 bp Feature: domain Description: HTH_17 Location: 7472 -7571 bp Feature: gene Location: 7717-9186 bp Feature: domain Description: FtsK Location: 7993-9100 bp Feature: domain Description: FtsK Location: 7993-9100 bp Feature: gene Location: 9375-10301 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 9738-9993 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 9738-9993 bp Feature: gene Location: 10714-11946 bp Feature: gene Location: 12053-12214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), FtsK (COG1674), RVT-DGRs/RVT-GII/RVT-UG17/RVT-CRISPR(RVT-UNC)