myRT

myRT report for GCA_009774675.1_ASM977467v1

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Seq: VSOF01000154.1 Kineothrix sp. isolate SC1194_S47_bin.19 SC1194_S47_SC1194_S47_bin.19_contig_154, whole genome shotgun sequence (10000 bp)
Overview 1 RT 1: 2152-8141 bp Neighborhood of RT #1 [2152, 8209] myo_inos_iolC_N AAA-ATPase_like PDDEXK_9 RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Feature: gene Location: 2152-3348 bp Feature: domain Description: myo_inos_iolC_N Location: 2347-3301 bp Feature: domain Description: myo_inos_iolC_N Location: 2347-3301 bp Feature: gene Location: 3609-5327 bp Feature: domain Description: AAA-ATPase_like Location: 3630-4521 bp Feature: domain Description: AAA-ATPase_like Location: 3630-4521 bp Feature: domain Description: PDDEXK_9 Location: 4998-5310 bp Feature: domain Description: PDDEXK_9 Location: 4998-531 0 bp Feature: gene Location: 5434-6099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5443-5644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5443-5644 bp Feature: domain Description: GIIM Note: maturase Location: 5704-5920 bp Feature: domain Description: GIIM Note: maturase Location: 5704-5920 bp Feature: gene Location: 6232-7242 bp Feature: domain Description: Phage_int_SAM_1 Location: 6277-6529 bp Feature: domain Description: Phage_int_SAM_1 Location: 6277-6529 bp Feature: domain Description: INT_RitC_C_like Location: 6610-7162 bp Feature: domain Description: INT_RitC_C_like Location: 661 0-71 62 bp Feature: gene Location: 7229-8209 bp Feature: domain Description: INT_RitB_C_like Location: 7565-8141 bp Feature: domain Description: INT_RitB_C_like Location: 7565-81 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT myo_inos_iolC_N (TIGR04382), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797)

Seq: VSOF01000017.1 Kineothrix sp. isolate SC1194_S47_bin.19 SC1194_S47_SC1194_S47_bin.19_contig_17, whole genome shotgun sequence (27051 bp)
Overview 1 RT 1: 15934-21756 bp Neighborhood of RT #1 [15934, 21779] RVT-UG24 RAYT RHOD Feature: gene Location: 15934-16818 bp Feature: gene Location: 16815-17345 bp Feature: gene Location: 17368-20811 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 17908-18364 bp Feature: RT Description: RVT-UG2 4 Note: UG2 4 RT Location: 17908-18364 bp Feature: gene Location: 20934-21194 bp Feature: domain Description: RAYT Location: 20946-21183 bp Feature: domain Description: RAYT Location: 2 0946-2 1183 bp Feature: gene Location: 21381-21779 bp Feature: domain Description: RHOD Location: 21501-21756 bp Feature: domain Description: RHOD Location: 2 1501-2 1756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG24, RAYT (COG1943), RHOD (smart00450)

Seq: VSOF01000430.1 Kineothrix sp. isolate SC1194_S47_bin.19 SC1194_S47_SC1194_S47_bin.19_contig_430, whole genome shotgun sequence (3593 bp)
Overview 1 RT 1: 258-3590 bp Neighborhood of RT #1 [258, 3590] TraG-D_C RVT-GII HNHc Feature: gene Location: 258-680 bp Feature: domain Description: TraG-D_C Location: 408-657 bp Feature: domain Description: TraG-D_C Location: 408-657 bp Feature: gene Location: 838-2742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1153-1885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1153 -1885 bp Feature: domain Description: HNHc Note: nucleases Location: 2464-2632 bp Feature: domain Description: HNHc Note: nucleases Location: 2464-263 2 bp Feature: gene Location: 2821-3036 bp Feature: gene Location: 3147-3590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, HNHc (smart00507)

Seq: VSOF01000592.1 Kineothrix sp. isolate SC1194_S47_bin.19 SC1194_S47_SC1194_S47_bin.19_contig_592, whole genome shotgun sequence (2381 bp)
Overview 1 RT 1: 176-2161 bp Neighborhood of RT #1 [176, 2379] RVT-GII Feature: gene Location: 176-709 bp Feature: gene Location: 820-1035 bp Feature: gene Location: 1114-2379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1429-2161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 29-2161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VSOF01000780.1 Kineothrix sp. isolate SC1194_S47_bin.19 SC1194_S47_SC1194_S47_bin.19_contig_780, whole genome shotgun sequence (2039 bp)
Overview 1 RT 1: 162-2037 bp Neighborhood of RT #1 [162, 2037] RVT-GII GIIM Feature: gene Location: 162-1478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423-1116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423-1116 bp Feature: domain Description: GIIM Note: maturase Location: 1203-1401 bp Feature: domain Description: GIIM Note: maturase Location: 1203-1401 bp Feature: gene Location: 1444-2037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VSOF01000783.1 Kineothrix sp. isolate SC1194_S47_bin.19 SC1194_S47_SC1194_S47_bin.19_contig_783, whole genome shotgun sequence (3002 bp)
Overview 1 RT 1: 2-2633 bp Neighborhood of RT #1 [2, 2749] RVT-GII HNHc Feature: gene Location: 2-136 bp Feature: gene Location: 518-691 bp Feature: gene Location: 842-2749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1181-1928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1181-1928 bp Feature: domain Description: HNHc Note: nucleases Location: 2495-2633 bp Feature: domain Description: HNHc Note: nucleases Location: 2495-26 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)