myRT

myRT report for GCA_009774785.1_ASM977478v1

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Seq: VSOJ01000217.1 Clostridiales bacterium isolate SC1198_S51_bin.10 SC1198_S51_SC1198_S51_bin.10_contig_217, whole genome shotgun sequence (3834 bp)
Overview 1 RT 1: 3-3825 bp Neighborhood of RT #1 [3, 3825] Peptidase_C39_2 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3-1109 bp Feature: domain Description: Peptidase_C39_2 Location: 696-1089 bp Feature: domain Description: Peptidase_C39_2 Location: 696-1 089 bp Feature: gene Location: 1252-3471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1927-2737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 927-2737 bp Feature: domain Description: Intron_maturas2 Location: 2863-3088 bp Feature: domain Description: Intron_maturas2 Location: 2863-3088 bp Feature: domain Description: HNHc Note: nucleases Location: 3280-3433 bp Feature: domain Description: HNHc Note: nucleases Location: 3280-3433 bp Feature: gene Location: 3565-3825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Peptidase_C39_2 (pfam13529)

Seq: VSOJ01000299.1 Clostridiales bacterium isolate SC1198_S51_bin.10 SC1198_S51_SC1198_S51_bin.10_contig_299, whole genome shotgun sequence (2674 bp)
Overview 1 RT 1: 466-2665 bp Neighborhood of RT #1 [466, 2673] RVT-DGRs ChiA1_BD Rho_N Phage_holin_4_1 Feature: gene Location: 466-1530 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 676-1261 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 676-12 61 bp Feature: gene Location: 1506-2339 bp Feature: domain Description: ChiA1_BD Location: 1884-2022 bp Feature: domain Description: ChiA1_BD Location: 1884-2 02 2 bp Feature: domain Description: Rho_N Location: 2226-2328 bp Feature: domain Description: Rho_N Location: 2 2 2 6-2 32 8 bp Feature: gene Location: 2359-2673 bp Feature: domain Description: Phage_holin_4_1 Location: 2416-2665 bp Feature: domain Description: Phage_holin_4_1 Location: 2 416-2 665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ChiA1_BD (cd12214), Rho_N (smart00959), Phage_holin_4_1 (pfam05105), RVT-DGRs