myRT

myRT report for GCA_009775365.1_ASM977536v1

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Seq: VSPM01000100.1 Muribaculaceae bacterium isolate S9745_S9_bin.7 S9745_S9_S9745_S9_bin.7_contig_100, whole genome shotgun sequence (8381 bp)
Overview 1 RT 1: 2-4427 bp Neighborhood of RT #1 [2, 4888] WYL RVT-Retrons PRK11071 PRK13531 Feature: gene Location: 2-139 bp Feature: gene Location: 168-1106 bp Feature: domain Description: WYL Location: 558-1080 bp Feature: domain Description: WYL Location: 558-1 080 bp Feature: gene Location: 1465-2544 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1654-2245 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 654-2245 bp Feature: gene Location: 2541-3473 bp Feature: domain Description: PRK11071 Location: 2550-2922 bp Feature: domain Description: PRK1 1 071 Location: 2550-2922 bp Feature: gene Location: 3473-4888 bp Feature: domain Description: PRK13531 Location: 3491-4427 bp Feature: domain Description: PRK1 3531 Location: 3491 -4427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), RVT-Retrons, PRK11071 (esterase YqiA; Provisional), PRK13531 (regulatory ATPase RavA; Provisional)

Seq: VSPM01000013.1 Muribaculaceae bacterium isolate S9745_S9_bin.7 S9745_S9_S9745_S9_bin.7_contig_13, whole genome shotgun sequence (51987 bp)
Overview 1 RT 1: 324-2378 bp Neighborhood of RT #1 [324, 2383] RVT-GII GIIM TIGR00004 Feature: gene Location: 324-1604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525-1140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 5-1140 bp Feature: domain Description: GIIM Note: maturase Location: 1200-1431 bp Feature: domain Description: GIIM Note: maturase Location: 12 00-1431 bp Feature: gene Location: 1851-2006 bp Feature: gene Location: 2009-2383 bp Feature: domain Description: TIGR00004 Location: 2018-2378 bp Feature: domain Description: TIGR00004 Location: 2 018-2 378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TIGR00004 (reactive intermediate/imine deaminase)

Seq: VSPM01000136.1 Muribaculaceae bacterium isolate S9745_S9_bin.7 S9745_S9_S9745_S9_bin.7_contig_136, whole genome shotgun sequence (3691 bp)
Overview 1 RT 1: 3-2841 bp Neighborhood of RT #1 [3, 3614] TIGR00376 TIGR00376 TIGR00376 PIN_VapC_PhoHL-ATPase RVT-AbiP2 Feature: gene Location: 3-1895 bp Feature: domain Description: TIGR00376 Location: 189-348 bp Feature: domain Description: TIGR003 76 Location: 189-3 48 bp Feature: domain Description: TIGR00376 Location: 561-690 bp Feature: domain Description: TIGR003 76 Location: 561-690 bp Feature: domain Description: TIGR00376 Location: 981-1326 bp Feature: domain Description: TIGR003 76 Location: 981-13 26 bp Feature: domain Description: PIN_VapC_PhoHL-ATPase Location: 1503-1869 bp Feature: domain Description: PIN_VapC_PhoHL-ATPase Location: 1503 -1869 bp Feature: gene Location: 1899-3614 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2367-2841 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 23 67-2841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR00376 (DNA helicase, putative), PIN_VapC_PhoHL-ATPase (cd09883), RVT-AbiP2