myRT

myRT report for GCA_009781125.1_ASM978112v1

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Seq: WQYS01000238.1 Acidobacteriaceae bacterium isolate Emb289P4bin26 Ga0123357_10068847, whole genome shotgun sequence (4708 bp)
Overview 1 RT 1: 84-4707 bp Neighborhood of RT #1 [84, 4707] TniQ COG4951 SSL2 RVT-GII GIIM Feature: gene Location: 84-593 bp Feature: domain Description: TniQ Location: 225-357 bp Feature: domain Description: TniQ Location: 225-357 bp Feature: gene Location: 639-2873 bp Feature: domain Description: COG4951 Location: 675-1602 bp Feature: domain Description: COG4951 Location: 675-1 602 bp Feature: domain Description: SSL2 Location: 1686-2793 bp Feature: domain Description: SSL2 Location: 1 686-2793 bp Feature: gene Location: 2926-4179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3139-3796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 39-3796 bp Feature: domain Description: GIIM Note: maturase Location: 3874-4093 bp Feature: domain Description: GIIM Note: maturase Location: 3874-4093 bp Feature: gene Location: 4396-4707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TniQ (pfam06527), COG4951 (Uncharacterized protein ), SSL2 (COG1061), RVT-GII, GIIM (pfam08388)

Seq: WQYS01000317.1 Acidobacteriaceae bacterium isolate Emb289P4bin26 Ga0123357_10095231, whole genome shotgun sequence (3861 bp)
Overview 1 RT 1: 1-2974 bp Neighborhood of RT #1 [1, 3048] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 1-828 bp Feature: domain Description: DDE_Tnp_IS66 Location: 34-778 bp Feature: domain Description: DDE_Tnp_IS66 Location: 34-778 bp Feature: gene Location: 938-2461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1424-2087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 4-2 087 bp Feature: domain Description: GIIM Note: maturase Location: 2153-2357 bp Feature: domain Description: GIIM Note: maturase Location: 2 153-2 357 bp Feature: gene Location: 2451-2756 bp Feature: gene Location: 2800-3048 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2884-2974 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 884-2 974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)

Seq: WQYS01000379.1 Acidobacteriaceae bacterium isolate Emb289P4bin26 Ga0123357_10119936, whole genome shotgun sequence (3317 bp)
Overview 1 RT 1: 585-3315 bp Neighborhood of RT #1 [585, 3315] RVT-GII Feature: gene Location: 585-917 bp Feature: gene Location: 958-1254 bp Feature: gene Location: 1417-2889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1828-2518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1828-2518 bp Feature: gene Location: 2998-3165 bp Feature: gene Location: 3190-3315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WQYS01000411.1 Acidobacteriaceae bacterium isolate Emb289P4bin26 Ga0123357_10130331, whole genome shotgun sequence (3134 bp)
Overview 1 RT 1: 524-2950 bp Neighborhood of RT #1 [524, 3057] RVT-GII GIIM Feature: gene Location: 524-691 bp Feature: gene Location: 719-940 bp Feature: gene Location: 1795-3057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2011-2665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2011-2665 bp Feature: domain Description: GIIM Note: maturase Location: 2749-2950 bp Feature: domain Description: GIIM Note: maturase Location: 274 9-2950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WQYS01000513.1 Acidobacteriaceae bacterium isolate Emb289P4bin26 Ga0123357_10168690, whole genome shotgun sequence (2597 bp)
Overview 1 RT 1: 52-1489 bp Neighborhood of RT #1 [52, 1489] RVT-UNC Feature: gene Location: 52-276 bp Feature: gene Location: 559-990 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 679-883 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 679-883 bp Feature: gene Location: 1030-1188 bp Feature: gene Location: 1292-1489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17/RVT-DGRs/RVT-UG12(RVT-UNC)