myRT

myRT report for GCA_009782135.1_ASM978213v1

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Seq: WQUI01000015.1 Planctomycetaceae bacterium isolate Cu122P5bin25 JGI20166J26741_10052226, whole genome shotgun sequence (17515 bp)
Overview 1 RT 1: 643-3595 bp Neighborhood of RT #1 [643, 3600] RVT-GII GIIM murB Feature: gene Location: 643-2037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003-1663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 003-1 663 bp Feature: domain Description: GIIM Note: maturase Location: 1738-1936 bp Feature: domain Description: GIIM Note: maturase Location: 1 738-1 936 bp Feature: gene Location: 1615-2622 bp Feature: gene Location: 2725-3600 bp Feature: domain Description: murB Location: 2740-3595 bp Feature: domain Description: murB Location: 2740-3595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT murB (TIGR00179), RVT-GII, GIIM (pfam08388)

Seq: WQUI01000267.1 Planctomycetaceae bacterium isolate Cu122P5bin25 JGI20166J26741_11566807, whole genome shotgun sequence (11990 bp)
Overview 1 RT 1: 66-4330 bp Neighborhood of RT #1 [66, 4884] RVT-GII COG1033 MupV_like_SDR_e Feature: gene Location: 66-299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69-204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69-2 04 bp Feature: gene Location: 758-3076 bp Feature: domain Description: COG1033 Location: 767-3029 bp Feature: domain Description: COG1033 Location: 767-302 9 bp Feature: gene Location: 3355-4884 bp Feature: domain Description: MupV_like_SDR_e Location: 3478-4330 bp Feature: domain Description: MupV_like_SDR_e Location: 3478-4330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MupV_like_SDR_e (cd05263), RVT-GII, COG1033 (Predicted exporter protein, RND superfamily )

Seq: WQUI01000408.1 Planctomycetaceae bacterium isolate Cu122P5bin25 JGI20166J26741_11844439, whole genome shotgun sequence (3708 bp)
Overview 1 RT 1: 3-3707 bp Neighborhood of RT #1 [3, 3707] HTH_23 rve RVT-GII Feature: gene Location: 3-1394 bp Feature: domain Description: HTH_23 Location: 333-438 bp Feature: domain Description: HTH_23 Location: 3 3 3 -43 8 bp Feature: domain Description: rve Location: 702-1086 bp Feature: domain Description: rve Location: 702-1086 bp Feature: gene Location: 1768-3375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2293-3007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2293 -3 007 bp Feature: gene Location: 3438-3707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_23 (pfam13384), rve (pfam00665)