myRT

myRT report for GCA_009782285.1_ASM978228v1

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Seq: WRJK01000010.1 Clostridiales bacterium isolate Nt197P3bin80 Ga0082212_10000769, whole genome shotgun sequence (46770 bp)
Overview 1 RT 1: 41903-45554 bp Neighborhood of RT #1 [41903, 45592] DDE_Tnp_1 RVT-GII GIIM RelB_DinJ MarR Feature: gene Location: 41903-43240 bp Feature: domain Description: DDE_Tnp_1 Location: 42431-43007 bp Feature: domain Description: DDE_Tnp_1 Location: 42431 -43007 bp Feature: gene Location: 43329-43640 bp Feature: gene Location: 43798-44436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43801-44068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43801 -44068 bp Feature: domain Description: GIIM Note: maturase Location: 44137-44350 bp Feature: domain Description: GIIM Note: maturase Location: 441 37-44350 bp Feature: gene Location: 44552-44779 bp Feature: domain Description: RelB_DinJ Location: 44567-44729 bp Feature: domain Description: RelB_DinJ Location: 44567-44729 bp Feature: gene Location: 45140-45592 bp Feature: domain Description: MarR Location: 45203-45554 bp Feature: domain Description: MarR Location: 45203-45554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), RelB_DinJ (TIGR02384), MarR (pfam01047)

Seq: WRJK01000031.1 Clostridiales bacterium isolate Nt197P3bin80 Ga0082212_10002208, whole genome shotgun sequence (28616 bp)
Overview 1 RT 1: 3-2671 bp Neighborhood of RT #1 [3, 2808] RVT-GII Type_II_cohesin SLH SLH SLH Feature: gene Location: 3-929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231-855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 31-855 bp Feature: gene Location: 1166-1375 bp Feature: gene Location: 1621-2808 bp Feature: domain Description: Type_II_cohesin Location: 1714-2131 bp Feature: domain Description: Type_II_cohesin Location: 1714-2 131 bp Feature: domain Description: SLH Location: 2245-2308 bp Feature: domain Description: SLH Location: 2 2 45-2 308 bp Feature: domain Description: SLH Location: 2371-2500 bp Feature: domain Description: SLH Location: 2 371-2 500 bp Feature: domain Description: SLH Location: 2548-2671 bp Feature: domain Description: SLH Location: 2 548-2 671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Type_II_cohesin (cd08547), SLH (pfam00395), RVT-GII

Seq: WRJK01000032.1 Clostridiales bacterium isolate Nt197P3bin80 Ga0082212_10002304, whole genome shotgun sequence (27968 bp)
Overview 1 RT 1: 12983-18702 bp Neighborhood of RT #1 [12983, 18803] Avd_like Avd_like RVT-DGRs Big_3_5 Flg_new Big_3_5 Big_3_5 Big_3_5 RelB Feature: gene Location: 12983-13504 bp Feature: domain Description: Avd_like Location: 13025-13214 bp Feature: domain Description: Avd_like Location: 13 025-13 214 bp Feature: domain Description: Avd_like Location: 13316-13481 bp Feature: domain Description: Avd_like Location: 13 3 16-13 481 bp Feature: gene Location: 13695-13901 bp Feature: gene Location: 14019-14975 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14127-14736 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14127-1473 6 bp Feature: gene Location: 14981-18385 bp Feature: domain Description: Big_3_5 Location: 16607-16823 bp Feature: domain Description: Big_3 _5 Location: 16607-16823 bp Feature: domain Description: Flg_new Location: 16850-16985 bp Feature: domain Description: Flg_new Location: 16850-16985 bp Feature: domain Description: Big_3_5 Location: 17387-17639 bp Feature: domain Description: Big_3 _5 Location: 173 87-1763 9 bp Feature: domain Description: Big_3_5 Location: 17681-17897 bp Feature: domain Description: Big_3 _5 Location: 17681-17897 bp Feature: domain Description: Big_3_5 Location: 17918-18110 bp Feature: domain Description: Big_3 _5 Location: 17918-18110 bp Feature: gene Location: 18591-18803 bp Feature: domain Description: RelB Location: 18594-18702 bp Feature: domain Description: RelB Location: 18594-18702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Big_3_5 (pfam16640), Flg_new (pfam09479), RelB (pfam04221)