myRT

myRT report for GCA_009782825.1_ASM978282v1

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Seq: WRII01000002.1 Peptococcaceae bacterium isolate Nt197P3bin37 Ga0082212_10000121, whole genome shotgun sequence (117726 bp)
Overview 1 RT 1: 13361-17388 bp Neighborhood of RT #1 [13361, 17396] PDDEXK_2 RVT_N RVT-GII GIIM OmpR Feature: gene Location: 13361-14068 bp Feature: domain Description: PDDEXK_2 Location: 13505-13991 bp Feature: domain Description: PDDEXK_2 Location: 1 3505-1 3991 bp Feature: gene Location: 14482-14616 bp Feature: gene Location: 14666-16156 bp Feature: RT Description: RVT_N Location: 14717-14960 bp Feature: RT Description: RVT_N Location: 1 471 7-1 4960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15005-15656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5005-1 5656 bp Feature: domain Description: GIIM Note: maturase Location: 15716-15941 bp Feature: domain Description: GIIM Note: maturase Location: 1 571 6-1 5941 bp Feature: gene Location: 16318-16686 bp Feature: gene Location: 16701-17396 bp Feature: domain Description: OmpR Location: 16713-17388 bp Feature: domain Description: OmpR Location: 1 671 3-1 7388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), OmpR (COG0745)

Seq: WRII01000027.1 Peptococcaceae bacterium isolate Nt197P3bin37 Ga0082212_10001256, whole genome shotgun sequence (37376 bp)
Overview 1 RT 1: 23181-31719 bp Neighborhood of RT #1 [23181, 31742] RVT-Retrons PRK11886 PRK11886 Feature: gene Location: 23181-26042 bp Feature: gene Location: 26043-27821 bp Feature: gene Location: 27818-29386 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28424-29159 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 842 4-2 9159 bp Feature: gene Location: 29821-30198 bp Feature: gene Location: 30633-31742 bp Feature: domain Description: PRK11886 Location: 30666-31131 bp Feature: domain Description: PRK11886 Location: 30666-31131 bp Feature: domain Description: PRK11886 Location: 31212-31719 bp Feature: domain Description: PRK11886 Location: 312 12 -31719 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK11886 (bifunctional biotin-- ligase/biotin operon repressor BirA)

Seq: WRII01000045.1 Peptococcaceae bacterium isolate Nt197P3bin37 Ga0082212_10003131, whole genome shotgun sequence (23617 bp)
Overview 1 RT 1: 2621-6817 bp Neighborhood of RT #1 [2621, 6885] RVT-GII Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Feature: gene Location: 2621-2854 bp Feature: gene Location: 3155-3562 bp Feature: gene Location: 3907-4554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4132-4525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413 2-4525 bp Feature: gene Location: 4677-5912 bp Feature: domain Description: Phage_int_SAM_1 Location: 5052-5265 bp Feature: domain Description: Phage_int_SAM_1 Location: 5052-5265 bp Feature: domain Description: INT_RitA_C_like Location: 5346-5877 bp Feature: domain Description: INT_RitA_C_like Location: 53 46-5877 bp Feature: gene Location: 5905-6885 bp Feature: domain Description: INT_RitB_C_like Location: 6241-6817 bp Feature: domain Description: INT_RitB_C_like Location: 6241-6817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797)